Gene Information

Name : Pfl01_3013 (Pfl01_3013)
Accession : YP_348742.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3452953 - 3453684 bp
Length : 732 bp
Strand : +
Note : -

DNA sequence :
ATGGCGACTTCCGCCCAGAACACGCCACCACAACCGATCCAGCGTCCAGGACTGATCATCTCGACGATCAGCCTGGTACT
GCGCGTCATCGGTTTGCTGATCGCCTCGTTGCTGTTCTCGATCCTGATCGAGTTCGCTGGTTTGCTGCTGTTCTGGGGTG
ATCAGGGCTGGCTGCATAGTCAGGCCATGCTAACCAGTGAATTAGGCTGGCTCAGCGAGCACTTCAAATCTTCACTTCTC
ATCCAACAGCCTGGGCCAACGATTGTCCAGTGGCTGGATTTACTCAATCAGTGGCTACTGGTCAAAACTGGCTTTGCAGA
TTTTGCCCAGCAGGCGCGGGTATCGAGCATGGGCAACAGCTTCTGGGGGTGGATCAATCAGTTTTACGTGAGCATTGAAG
ATTTTGTGCTGGCGGCGGTGTATGTGACCTTTACCTTCATGGTGCGCCTGACCATTCTGGTCCTGGCCACACCCTTGTTT
CTGCTGGCCTCTCTCACCGGTTTTATCGATGGTTTGATGCGTCGCGACCTGCGCAAATTTGGCGCGGGGCGAGAAAGCAG
CTTTGTCTATCACCGCGCCAAGCGCGCAGTGATACCACTGCTGATCGTGCCCTGGATCATTTACCTATCCCTGCCCTTTT
CGCTCAATCCTATGGTCGTATTTTTGCCTTGTGCTGTAATGCTTGGCATCACAGTAGCAATCACGGCAAGTACATTTAAG
AAATATCTCTGA

Protein sequence :
MATSAQNTPPQPIQRPGLIISTISLVLRVIGLLIASLLFSILIEFAGLLLFWGDQGWLHSQAMLTSELGWLSEHFKSSLL
IQQPGPTIVQWLDLLNQWLLVKTGFADFAQQARVSSMGNSFWGWINQFYVSIEDFVLAAVYVTFTFMVRLTILVLATPLF
LLASLTGFIDGLMRRDLRKFGAGRESSFVYHRAKRAVIPLLIVPWIIYLSLPFSLNPMVVFLPCAVMLGITVAITASTFK
KYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C64 AAN62158.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-43 49
ORF SG67 AAN62289.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-42 49
RL035 AAP84162.1 conserved hypothetical protein Not tested PAPI-1 Protein 7e-44 49
unnamed ABR13374.1 hypothetical protein Not tested PAGI-5 Protein 5e-45 46
EXA46 ABD94655.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-45 46
RL046 AAP84172.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-45 45
pph73 CAI36114.1 hypothetical protein Not tested PPHGI-1 Protein 3e-47 44
PMI2587 YP_002152306.1 hypothetical protein Not tested Not named Protein 8e-31 42
STY4563 NP_458649.1 putative membrane protein Not tested SPI-7 Protein 2e-28 41
t4261 NP_807859.1 hypothetical protein Not tested SPI-7 Protein 2e-28 41
api28 CAF28502.1 putative membrane protein Not tested YAPI Protein 9e-26 41