Gene Information

Name : Pfl01_2765 (Pfl01_2765)
Accession : YP_348496.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 3190613 - 3191773 bp
Length : 1161 bp
Strand : -
Note : -

DNA sequence :
ATGAAGCAGAGACCTCGAATCTATTACACCGAAATCCAGAAAAAACTGATGTGGGATCACTGGCAGAAAGGCGACTCTCT
CCAGCACATAGCCCAACTATTTGATCGAAACCATTCATCGATACAGCGCATTTTGGCGGAAACAGGCGGTATCAGACCCT
CTGTACGCCGCAGATCCAGATTGGCGCTGACGTTGGCTGAGCGCGAAGAGATTTCGCGTGCAGTGGTGGCAGGAAACTCG
ATCCGCTCCATGGCCGCGCTGCTAGGGCGAGCAGCCTCTACGATCAGTCGGGAGATCAGACGCAACGGTGGCCAAGGATG
CTACCGGGCTAATCAAGCTGATCAGGCTGCCTGGGATCGCGCGCATCGACCTAAGGTTTGCAAGCTTGTTGAGAACCGAA
CAGTGGCGCAAATTGTTGCAGACAAGCTTCAATTACAGTGGTCTCCGGAACAAATTGCCGGTTGGTTGAAGCGTACCTAC
CCGGACGATGCGAGCTATCAGGTGTCACACGAAACGATCTATCGCACGCTCTTCATACAGGCTCGCGGGGCTCTGAAGAA
GGAGTTGCTTGAGCATTTACGGCGCACGCGGGCCATGCGTCGCTCGCGCCATCACACGCAGAAGAAAGAAAATCACGGTC
GAATTACTGACGCGGTATCGATCCGCGAACGCCCAGCCGCGGCTAAGGATCGGGCGGTTCCGGGTCACTGGGAAGGCGAC
CTGCTGTGCGGTAGCAGGAACAGCCAAATTGCCACTCTTGTTGAGCGACATACCCGCTACGTAATGCTGGTGAAATTGGA
CGGAAAGGATAGCGAGACGGTCATCAGCGCCCTAATTGAAAACGCCCGTAACTTGCCCCAAGAACTCTACAAATCGCTGA
CCTGGGATCGCGGCAAAGAGATGGCTGACCATAAACGCTTTACGGTGGCTACCGACATCAAGGTCTACTTCTGCGATCCT
CATCGTCCTTGGCAACGAGGATCAAATGAGAACACCAACGGGTTGTTAAGGCAGTACTTCCTGAAAGGAACCGACCTTGC
GGAGCACTCGCAAGCCACGCTCAATGAAGTGGCAAGGCAGCTAAATAGCCGCCCTCGGAAAACGCTAGACTACGAAACAC
CGGCAGAACGATTTAGCCAATCTGTTGCGTCGACCGGTTGA

Protein sequence :
MKQRPRIYYTEIQKKLMWDHWQKGDSLQHIAQLFDRNHSSIQRILAETGGIRPSVRRRSRLALTLAEREEISRAVVAGNS
IRSMAALLGRAASTISREIRRNGGQGCYRANQADQAAWDRAHRPKVCKLVENRTVAQIVADKLQLQWSPEQIAGWLKRTY
PDDASYQVSHETIYRTLFIQARGALKKELLEHLRRTRAMRRSRHHTQKKENHGRITDAVSIRERPAAAKDRAVPGHWEGD
LLCGSRNSQIATLVERHTRYVMLVKLDGKDSETVISALIENARNLPQELYKSLTWDRGKEMADHKRFTVATDIKVYFCDP
HRPWQRGSNENTNGLLRQYFLKGTDLAEHSQATLNEVARQLNSRPRKTLDYETPAERFSQSVASTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39292.1 - Not tested LPA Protein 3e-80 48
CDC7B_2034 YP_005163475.1 transposase-like protein Not tested Not named Protein 3e-56 43
DIP0764 NP_939135.1 transposase Not tested Not named Protein 4e-56 43
CDC7B_2059 YP_005163500.1 transposase-like protein Not tested Not named Protein 2e-56 42