Gene Information

Name : Pfl01_2520 (Pfl01_2520)
Accession : YP_348251.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Virulence
Product : thiol peroxidase (atypical 2-Cys peroxiredoxin)
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.5
Position : 2877369 - 2877869 bp
Length : 501 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTCAAGTCACGCTCAAAGGCAACCCGGTTCAAGTCAACGGCCAACTGCCACAAGCCGGTTCCAAGGCGCCAGCCTT
TTCCCTGGTAGCCGGCAATCTGTCCGACGTCACCCTGAAAGACTTCGCCGGCAAGCGCAAAGTGCTGAACATCTTCCCAA
GCGTCGACACCCCGACCTGCGCCACTTCCGTGCGCAAGTTCAACGCCCAGGCCAACGACATCAGCAACACCGTGGTGCTG
TGCATCTCGGCTGACCTGCCGTTCGCCCAGGCTCGCTTCTGCGGCGCCGAAGGCCTGGAAAACGTACAAAACCTGTCGAC
CCTGCGCGGCACCGAGTTCCTCGAGAACTACGGCGTGGCCATCGCTGACGGCCCGCTGAAAGGCCTGACCGCCCGTGCGG
TGGTTGTTCTGGACGAAAACGACAACGTCCTGCACAGCGAACTGGTCAAGGAAATTGCAGAAGAGCCTAACTACGAAGCG
GCACTGTCCGTTCTGAAATAA

Protein sequence : 
MAQVTLKGNPVQVNGQLPQAGSKAPAFSLVAGNLSDVTLKDFAGKRKVLNIFPSVDTPTCATSVRKFNAQANDISNTVVL
CISADLPFAQARFCGAEGLENVQNLSTLRGTEFLENYGVAIADGPLKGLTARAVVVLDENDNVLHSELVKEIAEEPNYEA
ALSVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-36 47
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-36 47
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 2e-36 46
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 1e-36 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_2520 YP_348251.1 thiol peroxidase (atypical 2-Cys peroxiredoxin) VFG0087 Protein 5e-37 46