Gene Information

Name : Pfl01_2262 (Pfl01_2262)
Accession : YP_347994.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Unknown
Product : catalase-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : -
Position : 2595603 - 2597036 bp
Length : 1434 bp
Strand : -
Note : -

DNA sequence :
ATGAACAAGCTGACGACTGCCGCGGGCGCGCCCGTGGTTGATAACAACAACGTACAGACCGCCGGCCCCAGAGGCCCGAT
GCTGTTGCAGGACGTATGGTTGCTGGAAAAACTGGCGCACTTCGATCGGGAAGTCATCCCCGAGCGGCGCATGCACGCCA
AGGGTTCCGGCGCGTTCGGCACCTTCACCGTGACCCACGACATCACCCGTTTCACCAAGGCCAGGCTGTTTTCCAGCGTG
GGCAAGACCACCGATGTGTTCGTCCGGTTTTCGACCGTGGCCGGGGAGCGTGGCGCGGCGGATGCCGAGCGTGACATCCG
TGGATTCGCCATCAAGTTCTATACCGAGCAAGGCAACTGGGACTTGGTGGGCAACAACACGCCGGTGTTCTTTCTGCGCG
ATCCGTTGAAATTCCCCGACCTCAACCATGCGGTCAAACGCGACCCACGCACCAACATGCGCAGCGCCCGCAACAATTGG
GATTTCTGGACGTTGCTGCCGGAAGCGCTGCACCAGGTCACGATTGTCATGAGCGATCGTGGCCTGCCGCGCACCTACCG
CCACATGCACGGTTTCGGCAGCCACACCTTCAGTTTCATCAGCCCGGCGAACGAACGTTTCTGGGTGAAGTTCACCTGGA
AGACTCAACAAGGCATCGAAAACCTGACCGACCAACAGGCCGCGACCCTGATCGGCGATGACCGCGAAAGCGCCCAGCGC
GACCTGTACAACGCCATCGAGGAAGGTCACTTCCCGCAATGGAAGCTCTACGTGCAAGTGATGCCGGAGCTGGATGCCGA
GACTTACCCGATCAACCCGTTCGACCTGACCAAGGTCTGGCCCCACGCGGATTACCCGCTGATCGAAGTTGGTGTGCTCG
AACTCAACCGTAATCCGGACAACTACTTCGCCGACGTCGAACAGGCGGCCTTCAACCCGGCCAACGTGGTGCCCGGCATC
AGTTTCTCACCGGACAAAATGCTCCAGGCGCGCCTTTTCTCCTATGGCGATGCCCAGCGCTATCGCGTCGGCGTCAACCA
TCATCAGATCCCCGTGAATGCCCCACGCTGCCCGGTCAACAGTTATCACCGGGACGGCCAGATGCGCACCGATGCGAACG
CGGGCAGCACAATCGGGTACGAGCCCAACAGCTATGGCCAGTGGGCCGAGCAACCGGATTTCAGCGAGCCACCGCTGGCC
CTGAAAGGCAGCGCCGGGCACTGGAATCACCGTGAGGACGACGATTACTTCTCGCAACCGGGCGCGCTGTTCCGGGCCAT
GTCCACCGCCCAGCAACAGGTCTTGTTCGAGAACACCGCGCGCTCGATCCATGGCGCCAGTGCCCAGACCCGGCAACGCC
ACATCGATAACTGCACTCGTGCCGATCCGGCGTACGGTGCGGGTGTTGCACAGGCCATCGAAGCACTGGGCTGA

Protein sequence :
MNKLTTAAGAPVVDNNNVQTAGPRGPMLLQDVWLLEKLAHFDREVIPERRMHAKGSGAFGTFTVTHDITRFTKARLFSSV
GKTTDVFVRFSTVAGERGAADAERDIRGFAIKFYTEQGNWDLVGNNTPVFFLRDPLKFPDLNHAVKRDPRTNMRSARNNW
DFWTLLPEALHQVTIVMSDRGLPRTYRHMHGFGSHTFSFISPANERFWVKFTWKTQQGIENLTDQQAATLIGDDRESAQR
DLYNAIEEGHFPQWKLYVQVMPELDAETYPINPFDLTKVWPHADYPLIEVGVLELNRNPDNYFADVEQAAFNPANVVPGI
SFSPDKMLQARLFSYGDAQRYRVGVNHHQIPVNAPRCPVNSYHRDGQMRTDANAGSTIGYEPNSYGQWAEQPDFSEPPLA
LKGSAGHWNHREDDDYFSQPGALFRAMSTAQQQVLFENTARSIHGASAQTRQRHIDNCTRADPAYGAGVAQAIEALG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 8e-176 73
katA YP_005126717.1 catalase Not tested Not named Protein 2e-96 54
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 3e-92 52
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 3e-92 52
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 3e-92 52
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 3e-92 52