|
Name : Pfl01_0222 (Pfl01_0222) Accession : YP_345955.1 Strain : Pseudomonas fluorescens Pf0-1 Genome accession: NC_007492 Putative virulence/resistance : Virulence Product : response regulator receiver domain-containing protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 263562 - 264494 bp Length : 933 bp Strand : + Note : - DNA sequence : ATGAGTCTTGAAACCTTCGGTCAGCCGTTGCTGACCTTTCCCGATGCGGAAAAAAGTCCCCTGAGCATTCGCGCCAAGGC GCTGGTGTTCGTCGATCCACGCTCGCGCCAGTTGCGCGAAGAAATGGCCCAACTCGCACCGCGCTCGATCTCGGTGTTGA TTCGCGGCGAGACCGGCACCGGCAAGGAATTACTCGCTCGCCATATCCATCGCGCCAGTGATCGCAGCGGATTGTTTGTC TCGGTCAATTGCGGCGCGATCAGCCCGACCTACGCCGATGCGGAATTGTTCGGTTATGCCGCCGGCAGCTACAGCGGTTC GGCCAGCAGTCGCGCCGGTTGGTTCGGTTCAGCCAACGGCGGCACCTTGTACTTGGACGAGATCGGCGACCTGCCGTTGC CGATCCAGATCAAGTTGCTTTCCGCACTGGAAAACCACGAAGTCACCCGCGTCGGTGCGCATCAGCCGAGCCCGGTGGAC GTGCGCCTGGTAGCGGCGACCAGCATCGATCTGGCGCAAGCGGTGGCGGCAGGGAAATTCCACGAGCGGCTTTATCACTA TCTCAGCGAAGGGCATCTGGAACTGCCAGCGTTGCGCGCGCGGGTTGGCGACATTCTGTCGTTGGCCGAGTACTTCCTCG GCATTTACAGCCAGCGTCTGGATCTGCCGGTGCCTTTGATCAGCGAAGCGGCGCAGCAGGTGCTGGAACAGCACAGTTGG CCGGGCAACACCCGGGAGCTGGAAAACGTCATTCATTTTGCGTTGCTGGTGAGCACCGGCGACGAAATCCTGCCGGAGCA CCTGAACCTGCCCGAGGTGTCTGGGCCGCAGGTTCAGATCGAGCGTCAGGTGGCGAGCGTCAGCCTCAACGGCACCGTCG ACGAACGTAAGGCATTGAAAGAATGGCTGTTGAGCTTGAGCGAGGCGTTGTAA Protein sequence : MSLETFGQPLLTFPDAEKSPLSIRAKALVFVDPRSRQLREEMAQLAPRSISVLIRGETGTGKELLARHIHRASDRSGLFV SVNCGAISPTYADAELFGYAAGSYSGSASSRAGWFGSANGGTLYLDEIGDLPLPIQIKLLSALENHEVTRVGAHQPSPVD VRLVAATSIDLAQAVAAGKFHERLYHYLSEGHLELPALRARVGDILSLAEYFLGIYSQRLDLPVPLISEAAQQVLEQHSW PGNTRELENVIHFALLVSTGDEILPEHLNLPEVSGPQVQIERQVASVSLNGTVDERKALKEWLLSLSEAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | AAT96161.1 | HrpS | Virulence | T-PAI | Protein | 4e-30 | 43 |
| hrpS | AAT96215.1 | HrpS | Virulence | T-PAI | Protein | 4e-30 | 43 |
| hrpS | ABQ88367.1 | HrpS | Virulence | Hrp PAI | Protein | 2e-34 | 42 |
| hrpS | AAA17650.1 | positive regulatory factor | Not tested | Hrp PAI | Protein | 2e-34 | 42 |
| hrpS | AAC35800.1 | transcriptional regulator | Virulence | Hrp PAI | Protein | 6e-32 | 42 |
| hrpS | NP_791207.1 | type III transcriptional regulator HrpS | Virulence | Hrp PAI | Protein | 2e-31 | 41 |
| hrpS | AAC34753.1 | HrpS | Virulence | Hrp PAI | Protein | 2e-31 | 41 |
| hrpR | NP_791206.1 | type III transcriptional regulator HrpR | Virulence | Hrp PAI | Protein | 1e-30 | 41 |
| hrpR | AAC34752.1 | HrpR | Virulence | Hrp PAI | Protein | 8e-31 | 41 |
