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Name : Pfl01_2178 (Pfl01_2178) Accession : YP_347910.1 Strain : Pseudomonas fluorescens Pf0-1 Genome accession: NC_007492 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 2459275 - 2460885 bp Length : 1611 bp Strand : - Note : - DNA sequence : ATGAATCAGGACAATCTGATCGAAATCCGCGACCTGGCCGTCGAATTCGGTTTCGGCGAGCGTGTGCACCGGGTCGTGGA AGGCGTGAGTTTCGACATCAAGCGCGGTGAAACCCTCGCGTTGGTCGGCGAATCCGGCTCGGGCAAATCGGTGACCGCGC ACTCGATCCTGCGCTTGCTGCCCTACCCGCTGGCGCGGCATCCGGCCGGCAGCATCAATTATTCCGGGCAGAACCTGCTG GAACTGGGCGAAAAGACCATCCGTCACATTCGCGGCAACCGGATCGCGATGATCTTTCAGGAGCCGATGACCTCGCTCAA CCCGCTGCACTCGATCGAGAAGCAGATCAACGAGGTGCTGGGTATCCACAAGGGCCTGACCGGCAAAGTCGCGACCAAGC GCACGCTGGAGTTGCTGGAGATGGTCGGCATCCCCGAGCCGCACAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCCGGC GGCCAGCGTCAGCGGGTGATGATCGCCATGGCCCTGGCCAACGAGCCGGAACTGCTGATCGCCGACGAACCGACCACTGC GCTGGACGTGACCGTTCAGCTGAAAATCCTCGACCTGCTCAAGGAATTGCAGGCCCGATTAGGCATGGCGCTGTTACTGA TCAGTCACGATTTGAACCTCGTGCGAAGAATTGCGCATCGTGTATGTGTCATGCAGCGCGGTTGCATCGTCGAACAGGCA TCGTGCGAAGAGCTGTTCCGTTCGCCGCAGCATCCGTACACTCGGGAACTGCTTGGCGCAGAGCCCAGCGGAGGCCCGGC GAGCAATAAAATCGGGGCGCCGCTGCTTGAAGTCGAGGATCTGAAAGTCTGGTTCCCGATCAAGAAAGGCCTGCTCAAGC GCACGGTGGATCACGTCAAGGCAGTGGACGGCATCAATTTCAGCCTGCCTCAGGGTCAGACCCTGGGGATCGTGGGGGAA AGCGGTTCCGGCAAATCCACCCTGGGTCTGGCGATCCTGCGGTTGATCGGCAGCAAAGGTGCGATCCGTTTTGAAGGCAA GCAGCTAGACTGCCTGACGCAAAGCGAAGTCCGGCCGTTGCGCCGGGAGATGCAGGTGGTGTTTCAGGATCCGTTTGGCA GCCTGAGCCCGCGAATGTGCGTGAATGACATCGTTGGTGAAGGCCTGCGGATCCACAAGATGGGCACCGCTGCCGAGCAG GAAGCGGCGATTATTGCGGCATTGAAGGAGGTAGGTCTGGATCCGGAAACCCGGCACCGCTACCCCCACGAATTTTCCGG TGGGCAACGGCAGCGAATTGCCATAGCCCGGGCCTTGGTGCTCAAACCGGCGCTGATCCTGCTGGACGAGCCGACTTCGG CCCTCGACCGGACGGTGCAGCGGCAAGTGGTGGAGCTGTTGCGCTCACTGCAAGCCAAGTACAACCTGACGTATTTGTTC ATCAGCCATGACCTGGCTGTCGTCAAAGCGCTGAGCCACCAGCTGATGGTGGTCAAGCATGGCCAAGTGGTCGAACAGGG AGACGCGCAAAGTATCTTTGCCGCCCCCCAACATTCGTATACACAGCAGTTGCTGGAGGCCGCTTTCCTGGCACCAGCCA CTGCGCAATAA Protein sequence : MNQDNLIEIRDLAVEFGFGERVHRVVEGVSFDIKRGETLALVGESGSGKSVTAHSILRLLPYPLARHPAGSINYSGQNLL ELGEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVLGIHKGLTGKVATKRTLELLEMVGIPEPHKRLKALPHELSG GQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILDLLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGCIVEQA SCEELFRSPQHPYTRELLGAEPSGGPASNKIGAPLLEVEDLKVWFPIKKGLLKRTVDHVKAVDGINFSLPQGQTLGIVGE SGSGKSTLGLAILRLIGSKGAIRFEGKQLDCLTQSEVRPLRREMQVVFQDPFGSLSPRMCVNDIVGEGLRIHKMGTAAEQ EAAIIAALKEVGLDPETRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKYNLTYLF ISHDLAVVKALSHQLMVVKHGQVVEQGDAQSIFAAPQHSYTQQLLEAAFLAPATAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-78 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-78 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-78 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-78 | 42 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-98 | 42 |
