Gene Information

Name : Pfl01_2123 (Pfl01_2123)
Accession : YP_347855.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.99.3
Position : 2409350 - 2410840 bp
Length : 1491 bp
Strand : +
Note : -

DNA sequence :
ATGACAACGACCCGCAACGACTGGGAACAACGCTTCCAGTCCCTGACCCTCGAATCCCGCGCCTTCATCAATGGCGAATA
CCGCCCGGCCATCAGCGGCGAGACCTTCGAATGCCTGAGCCCCGTCGACGGCCGTTTCCTGGCCTCCGTGGCCAGCACCG
ATGAAGCCGACGCCAACCTCGCCGTTGAAGCTGCGCGCCAATCCTTCAACGCCGGCGTGTGGGCCAACAAGGCCCCGGCC
GAGCGCAAGCGCATCCTGATTCGCTTCGCCGATCTGATCCTGCAACACCAGGAAGAACTGGCGCTGCTCGAAACCCTCGA
CATGGGCAAACCGATCAGCGACTCGATGAGCATCGACATCCCGGCGACCGCCAACGCGATCCGCTGGAGCGCCGAAGCGA
TCGACAAGATCTACGACGAAGTCGCCGCCACCCCGCACGACCAACTCGGTCTGGTCACTCGCGAACCATCGGGCGTGGTT
GCTGCGATCGTGCCGTGGAACTTCCCGCTGATCATGGCCAGCTGGAAATTCGCCCCGGCGCTGGCGGCGGGTAACTCGTT
CATCCTCAAGCCTTCGGAAAAATCCCCGCTGACCGCGATCCGCATCGCGCAACTGGCGCTGGACGCGGGCATTCCGAAAG
GCGTGTTCAACGTCCTGCCAGGCTTCGGCCACACCGTCGGCAAGGCGCTGGCGCTGCACATGGACGTCGACGTGCTGGCC
TTCACCGGCTCCACCGCGATTGCCAAGCAACTGATGATTTATGCCGGCCAAAGCAATATGAAACGCGTCTGGCTCGAAGC
AGGGGGCAAGAGCCCGAACGTGGTGTTTGCCGACGCTCCGGACTTGCGCGCGGCAGCACAAGCGGCGGCCGGCGCCATTG
CGTTCAACCAGGGCGAAGTCTGCACCGCCGGCTCGCGCCTGCTGGTGGAGCGTTCGATCCGCGAGCAATTTATCCCGCTG
CTGGTGGAAGCGCTGCAAGCGTGGAAACCGGGGCACGCCCTGGATCCGGCGACCACCGTCGGCGCCGTGGTCGATCAGCG
TCAACTGGACAACGTGCTGCGCTATATCAGCATCGGTCGGGAGCAGGGTGCCGAGCTGATCGCCGGCGGCCGACGCACCC
TCGAAGACACCGGCGGCACCTACATCGAGCCGACGATTTTTGACGGCGTGACCAACGCCATGACCATCGCCAAGGAAGAA
ATCTTCGGCCCGGTGCTGTCGCTGATCACCTTCGACACCGTCGAGGAAGCGCTGCACATCGCCAACGACAGCATCTTCGG
CCTGGCCGCCGGGGTCTGGACCAGCAATCTGAGCAAGGCCCACACCTTCGCCCGTGGCCTGCGCGCCGGCAGCGTGTGGG
TCAACCAGTACGACGGCGGCGACATGACCGCGCCGTTCGGTGGCTTCAAACAGTCGGGCAACGGTCGCGACAAATCGCTG
CACGCGTTCGACAAGTACACCGAGCTGAAAGCGACCTGGATCAAGCTCTAA

Protein sequence :
MTTTRNDWEQRFQSLTLESRAFINGEYRPAISGETFECLSPVDGRFLASVASTDEADANLAVEAARQSFNAGVWANKAPA
ERKRILIRFADLILQHQEELALLETLDMGKPISDSMSIDIPATANAIRWSAEAIDKIYDEVAATPHDQLGLVTREPSGVV
AAIVPWNFPLIMASWKFAPALAAGNSFILKPSEKSPLTAIRIAQLALDAGIPKGVFNVLPGFGHTVGKALALHMDVDVLA
FTGSTAIAKQLMIYAGQSNMKRVWLEAGGKSPNVVFADAPDLRAAAQAAAGAIAFNQGEVCTAGSRLLVERSIREQFIPL
LVEALQAWKPGHALDPATTVGAVVDQRQLDNVLRYISIGREQGAELIAGGRRTLEDTGGTYIEPTIFDGVTNAMTIAKEE
IFGPVLSLITFDTVEEALHIANDSIFGLAAGVWTSNLSKAHTFARGLRAGSVWVNQYDGGDMTAPFGGFKQSGNGRDKSL
HAFDKYTELKATWIKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-129 58
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-76 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-76 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 9e-77 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 9e-77 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 9e-77 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_2123 YP_347855.1 aldehyde dehydrogenase VFG0082 Protein 1e-76 42