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Name : gabD (Pfl01_0187) Accession : YP_345920.1 Strain : Pseudomonas fluorescens Pf0-1 Genome accession: NC_007492 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 225316 - 226758 bp Length : 1443 bp Strand : + Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent DNA sequence : ATGCAGCTTAAAGACACCCAGTTGTTCCGCCAGCAAGCCTTCATCGATGGCGCATGGGTCGACGCGGACAACGGTCAGAC GATCAAGGTCAACAACCCGGCCACTGGCGAGATTCTGGGCACCGTGCCGAAGATGGGCGCTGCCGAAACCCGCCGCGCCA TCGAAGCCGCCGACAAGGCGCTTCCGGCCTGGCGTGCACTGACCGCCAAGGAGCGTGCAGGCAAACTGCGTCGCTGGTTC GAACTGATGATCGAGAACCAGGACGACCTCGCTCGCCTGATGACCCTCGAGCAAGGCAAACCACTGGCCGAAGCCAAGGG CGAAATCGTTTACGCCGCTTCGTTCATCGAGTGGTTCGCCGAAGAAGCCAAGCGCATCTACGGTGACGTGATTCCGGGCC ACCAGCCGGACAAGCGCCTGATCGTGATCAAGCAACCGATCGGCGTTACCGCTGCCATCACCCCGTGGAACTTCCCGGCG GCGATGATCACTCGTAAAGCGGGCCCGGCCCTGGCCGCCGGTTGCACCATGGTGCTCAAGCCTGCTTCGCAAACCCCGTT CTCTGCATTTGCCCTGGCCGAACTGGCCCAGCGCGCCGGCATCCCCAAAGGTGTGTTCAGCGTGGTGTCCGGCAGCGCCG GCGACATCGGCAGCGAGCTGACCAGCAACCCGATCGTGCGCAAACTGTCCTTCACCGGTTCGACCGAAATCGGTCGTCAG CTGATGTCGGAATGCGCCAAGGACATCAAGAAAGTCTCCCTGGAACTGGGCGGCAACGCGCCATTCATCGTGTTCGACGA CGCGGACCTGGATAAGGCCGTCGAAGGCGCGATCATTTCCAAGTACCGCAACAACGGCCAGACCTGCGTCTGCGCCAACC GTCTGTACATTCAGGATTCGGTTTACGACGCGTTCGCCGAGAAGCTGAAAGTGGCAGTCGCCAAGCTGAAGATCGGCAAC GGTCTGGAAGAAGGCACCACCACGGGTCCGCTGATCGACGAGAAAGCCGTGGCCAAGGTGCAAGAGCATATCGCTGACGC GGTGAGCAAAGGCGCGACCGTTCTGGCCGGCGGCAAGCCGATGGAAGGCAACTTCTTCGAGCCGACCATCCTGACCAACG TGCCGAAAGACGCTGCCGTGGCCAAGGAAGAAACCTTCGGTCCGCTGGCGCCGCTGTTCCGCTTCAAAGACGAAGCCGAC GTGATCGCGATGTCGAACGACACCGAGTTCGGTCTGGCCTCGTACTTCTACGCTCGCGACCTGGGCCGTGTGTTCCGTGT GGCGGAAGCCCTGGAGTACGGCATGGTCGGCGTCAACACCGGGCTGATCTCCAACGAAGTCGCGCCGTTCGGCGGCATCA AGGCCTCGGGCCTGGGCCGTGAAGGCTCCAAGTACGGCATCGAAGATTACCTGGAAATCAAATACCTCTGCCTGGGCATC TAA Protein sequence : MQLKDTQLFRQQAFIDGAWVDADNGQTIKVNNPATGEILGTVPKMGAAETRRAIEAADKALPAWRALTAKERAGKLRRWF ELMIENQDDLARLMTLEQGKPLAEAKGEIVYAASFIEWFAEEAKRIYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVLKPASQTPFSAFALAELAQRAGIPKGVFSVVSGSAGDIGSELTSNPIVRKLSFTGSTEIGRQ LMSECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDSVYDAFAEKLKVAVAKLKIGN GLEEGTTTGPLIDEKAVAKVQEHIADAVSKGATVLAGGKPMEGNFFEPTILTNVPKDAAVAKEETFGPLAPLFRFKDEAD VIAMSNDTEFGLASYFYARDLGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-158 | 67 |
