Gene Information

Name : Pfl01_1316 (Pfl01_1316)
Accession : YP_347048.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Unknown
Product : general substrate transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2271
EC number : -
Position : 1491363 - 1492694 bp
Length : 1332 bp
Strand : +
Note : -

DNA sequence :
ATGAGCCTCAATGTAATGGAGGCGGGCGCAAGCTCGTCCGTCGATCACGATGCCGAAAAAGCCCTGGTCAGCAAGGTCGC
CTGGCGCCTGATGCCGTTGATCATGGTCTGCTACCTGTTCGCGTTCTTCGACCGCATCAACATCAGTTTCGCCAAGTTCC
AGTTGCAGGCCGACCTGAGCCTGAGCGACACCGCTTACGGTCTCGGTGCCGGGCTGTTCGTGGTCGGTTACGTGCTGTTC
GAAGTACCGAGCAACATGATGCTGTACAAGGTTGGCGCGCGGCGCTGGATCGCCCGGATCATGATGTCCTGGGGCGTGGC
GACGGCGCTGATGGTGTTCGTCAACAGTGAATGGCAGTTCTACGTGCTGCGCTTTCTGATCGGCGCGATGGAGGCCGGTT
TCGCCCCCGGCGTGCTGTATTACCTGACGCTGTGGTTCCCGCAGCACTTCCGTGGCCGCATCACCTCAATGCTGTTTCTG
GCCTCGGCGTTTGCCGGGCTGGTCGGTGCGCCGTTCTCCGGACTGGTGCTGGAACACCTTGATGGCGTGTTGCAGATGCG
CGGCTGGCACTGGTTGTTTCTGCTCGGTGGCGTGCCCTGTGTCGGCCTCGGGTTTTTGGTACTGACCTTGCTCAAGGACC
GCATCGAGGACGCTCACTGGCTGACCCCGGAAGAGAAAAAACTGCTGGCCAGCCGCATCGCCCATCACGAACCGCACAAG
AGCGGCGGCTCGTTGCTGGCGGCGCTGAAGATTCCGGGTTTCCTGACTTTGGGGCTGATCTACTTCCTGATCCAGGTCGC
GTCCTACGGCCTGAATTTCTGGGCTCCGCAACTGATCCGCAGTGCCGGCACCGAGAGCCCGGTGATGATCGGCCTGCTGA
CCTCGATCCCTTACATTTGTGGTGCGATCAGCATGGTGGTGATCGGTCGTCTGTCCGATGCTACGGGTGAGCGGCGCAAG
TTTGTCGCGGGGCTGGTGATCGTCGGCGCCATCGGCTTTTTCAGCGCGGGGATTTTTGCCAGCCACACCACGTTTTTGAT
CGTCGCTCTTGGCTTGTTGGGCGCCGGGATCATTGCGTCGATTCCGAGCTTCTGGACCTTGCCACCGAAACTGCTGGCGG
GTGCCGGGGCCGGTGCGGCGGGCGGGATTGCGGTGATCAATACACTGGGGCAGTTCGGCGGCATCGTCAGTCCGGTGATG
GTCGGCCGGATCAAGGACCTGACTGGCAGTACTACACCGGCACTGTATGTCATCGGTGTGGCGGCACTGATCGCGGCGGC
GTTGCTGCTGTGGGGGCTGCCGCAGAAATTGCGCACACTCGACAAGTACTGA

Protein sequence :
MSLNVMEAGASSSVDHDAEKALVSKVAWRLMPLIMVCYLFAFFDRINISFAKFQLQADLSLSDTAYGLGAGLFVVGYVLF
EVPSNMMLYKVGARRWIARIMMSWGVATALMVFVNSEWQFYVLRFLIGAMEAGFAPGVLYYLTLWFPQHFRGRITSMLFL
ASAFAGLVGAPFSGLVLEHLDGVLQMRGWHWLFLLGGVPCVGLGFLVLTLLKDRIEDAHWLTPEEKKLLASRIAHHEPHK
SGGSLLAALKIPGFLTLGLIYFLIQVASYGLNFWAPQLIRSAGTESPVMIGLLTSIPYICGAISMVVIGRLSDATGERRK
FVAGLVIVGAIGFFSAGIFASHTTFLIVALGLLGAGIIASIPSFWTLPPKLLAGAGAGAAGGIAVINTLGQFGGIVSPVM
VGRIKDLTGSTTPALYVIGVAALIAAALLLWGLPQKLRTLDKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96055.1 major facilitator family transporter Not tested T-PAI Protein 2e-77 44
unnamed AAT96099.1 major facilitator family transporter Not tested T-PAI Protein 2e-77 44
unnamed AAT96228.1 major facilitator family transporter Not tested T-PAI Protein 2e-77 44
unnamed AAT96116.1 major facilitator family transporter Not tested T-PAI Protein 2e-77 44
unnamed AAT96176.1 major facilitator family transporter Not tested T-PAI Protein 2e-77 44