Gene Information

Name : Pfl01_1044 (Pfl01_1044)
Accession : YP_346776.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Unknown
Product : gamma-aminobutyraldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.8
Position : 1209730 - 1211154 bp
Length : 1425 bp
Strand : -
Note : catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation

DNA sequence :
ATGCAAACCAAACTCTTGATCAACGGCCAACTGGTCAACGGCGAAGGTCCGGCGCAGCCGGTGCTCAACCCGGCGCGTGG
CGAAGTGCTGGTGGAAATCAACGAGGCCACCGAGGCCCAGGTCGATGCCGCCGTGCGCGCCGCCGACAGTGCCTTCGCCG
AATGGTCGCAGACCACGCCGAAAGACCGTTCGCTGTTGCTGCTCAAACTCGCCGACGCCATCGAAGCCCACGGCGAAGAA
CTGGCGAAACTGGAATCGGACAACTGCGGCAAACCCTACAACGCCGCGCTGAACGACGAGATCCCGGCGATTGCCGACGT
GTTTCGTTTCTTCGCCGGCGCCAGCCGTTGCATGAGCGGTTCGGCCGGCGGCGAATACCTGCCCGGCCACACCTCAATGA
TCCGCCGCGACCCGGTGGGCGTAATCGCCTCTATCGCGCCGTGGAACTACCCGCTGATGATGGTCGCCTGGAAAATCGCC
CCGGCCCTCGCCGCCGGTAATACAGTGGTGCTCAAGCCGTCGGAACAAACCCCGCTGACCGCGTTGCGTCTGGCCGAACT
GGCGTCGGACATTTTCCCGGCGGGTGTACTCAATCTGGTGTTCGGGCGTGGACCGAGCGTGGGCAGTCCGCTGGTGACCC
ATCCGAAAGTGCGCATGGTCTCGCTGACCGGCTCCATCGCCACTGGTTCGAACATCATTTCCAGCACCGCCGACAGCGTC
AAACGCATGCACATGGAACTGGGCGGCAAGGCGCCGGTAATCATCTTCGACGACGCCGACATCGACGCGGCAGTCGAAGG
CATTCGTACCTTCGGTTTCTACAACGCCGGCCAGGACTGCACCGCCGCGTGCCGGATCTACGCCCAGCAAGGCATCTACG
ACAAGTTCGTCGAGAAGCTCGGCGCAGCGGTCAGCAGCATCAAGTACGGCTTGCAGGATGATCCGTCGACCGAGCTCGGG
CCGCTGATCACCGCCCAGCATCGCGACCGCGTGGCCGGGTTTGTCGAACGCGCTGTGGCGCAACCGCACATTCGCTTGAT
CACTGGCGGCAAGGCGGTGGACGGCAACGGTTTCTTCTTCGAACCGACGGTGCTGGCCGACGCGCAGCAGGACGACGAAA
TCGTCCGCCGCGAAGTGTTCGGGCCGGTGGTGTCGGTGACCAAATTCACCGACGAAGCCCAGGCGCTGGAGTGGGCCAAC
GATTCGGACTACGGCCTGGCGTCCTCGGTGTGGACGGCGGATGTAGGACGCGCCCATCGCTTGTCCGCACGCTTGCAGTA
CGGCTGCACCTGGGTGAATACGCACTTCATGCTTGTCAGCGAAATGCCTCATGGCGGTCAGAAACTGTCCGGCTACGGCA
AGGACATGTCCATGTACGGGCTGGAGGACTACACCACGGTTCGGCATGTGATGTTCAAGCACTAA

Protein sequence :
MQTKLLINGQLVNGEGPAQPVLNPARGEVLVEINEATEAQVDAAVRAADSAFAEWSQTTPKDRSLLLLKLADAIEAHGEE
LAKLESDNCGKPYNAALNDEIPAIADVFRFFAGASRCMSGSAGGEYLPGHTSMIRRDPVGVIASIAPWNYPLMMVAWKIA
PALAAGNTVVLKPSEQTPLTALRLAELASDIFPAGVLNLVFGRGPSVGSPLVTHPKVRMVSLTGSIATGSNIISSTADSV
KRMHMELGGKAPVIIFDDADIDAAVEGIRTFGFYNAGQDCTAACRIYAQQGIYDKFVEKLGAAVSSIKYGLQDDPSTELG
PLITAQHRDRVAGFVERAVAQPHIRLITGGKAVDGNGFFFEPTVLADAQQDDEIVRREVFGPVVSVTKFTDEAQALEWAN
DSDYGLASSVWTADVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSMYGLEDYTTVRHVMFKH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 6e-172 75
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 9e-58 41