Gene Information

Name : RSP_4032 (RSP_4032)
Accession : REF_jgi:RSP_4032
Strain :
Genome accession: NC_007488
Putative virulence/resistance : Unknown
Product : succinate semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.16
Position : 8935 - 10380 bp
Length : 1446 bp
Strand : +
Note : IMG reference gene:2512957473; PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase

DNA sequence :
ATGACCGATTTCAGACGCGAGAAGATCCTCGTCGGCGGCGACTGGATCCAGGCCGACGCGGGCGGCCGGATCGAGGTGAC
GAACCCGGCCACCGGCGCCGTGATCGGCACCGTCCCCGATGCGGGCGCGGCCGAGACGGCGCGCGCGGTGGCCGCCGCCG
AAGCGGCCTTCGGGCCGTGGCGCGCCCTTACCGCGGCCGAGCGCGCGACCCATCTGCGGAGGCTCGCTCAGGCGATCCTC
GATCACCGCGAGGCGCTGGCCGAGCTTCTGACCGAGGAACAGGGCAAGCCCCTGGCCGAAGCCCGCGGCGAGGTCGGCAT
GAGCGCAGCCTACATCCAGTGGTTCGCCGAAGAGGCCCGCCGCGTCTATGGCGAGGTGATCCCCTCGCCCTGGCCCGACC
GGCGGCTCCTCGTCACCCGGCAGCCGGTGGGCGTGGTGGCGGCGATCACGCCCTGGAACTTCCCCTCCTCGATGCTCGCC
CGCAAGATCGGCCCCGCGCTGGCCGCGGGCTGCACCGTCGTGGCCAAGCCCGCCAGCCAGACGCCCTTCTCGGGCCTGGC
CTGGGGGGTGCTGGGCGAGATGGCGGGCCTGCCCGCGGGCGTGCTGAACATCGTCACGGGCTCGGCCCGCGCCATCGGGG
GCGAGCTCACCGCCAACCCATCGGTGCGCAAGATCACCTTCACCGGCTCCACCCCCGTGGGCAAGGTGCTGCTCGCGCAG
GCCGCGGGCACGGTGAAGAAGATGTCGATGGAGCTCGGCGGCAACGCGCCGTTCCTCGTCTTCGACGATGCCGATCTCGA
CCGCGCCGTCGAGGGCGCCATCGCGGCCAAGTTCCGCAACGCGGGCCAGACCTGCGTCTGCACCAACCGCTTCTACGCGC
AGGCCGGCATCCACGATGAGTTCGTGAAGCGGCTGGCCGCGGCCACCGCCGCGCTGAAGGTGGGCCCGGGCGCACAGGAC
GGATCCGAGATCGGCCCGCTGATCGACGCGGCCGCGGTGGCCAAGACCGAGGAGATGGTGGCCGACGCCACCGCCAAAGG
CGGGCGCATCGTCACCGGCGGGCGGCGGCACACGGCCGGCGCGGGCTTCTACGAGCCCACCGTCATCGCCGACGCGACCG
ACGCCATGACCTTCGCCCGCGAGGAGATCTTCGGCCCCGTGGCCCCGGTCTTCCGCTTCGAGACCGAGGAGGAAGCGATC
CGGCGCGCCAACGCCACCGAGTACGGCCTCGCCTGCTACTTCTACACAAGCGATCTCGGCCGCGCCTTCCGCGTCTCCGA
GGCGCTCGATTACGGCATCGTCGGCGTGAACGAGGGGCTGGTCACCACCGAGGTCGCCCCCTTCGGCGGGGTGAAGGAGT
CGGGCTTCGGCTCCGAAGGCTCGCACCACGGGATGCAGGATTACCTGACGCTGAAATATACCGCGATGGGAGGGCTCGGC
CGATGA

Protein sequence :
MTDFRREKILVGGDWIQADAGGRIEVTNPATGAVIGTVPDAGAAETARAVAAAEAAFGPWRALTAAERATHLRRLAQAIL
DHREALAELLTEEQGKPLAEARGEVGMSAAYIQWFAEEARRVYGEVIPSPWPDRRLLVTRQPVGVVAAITPWNFPSSMLA
RKIGPALAAGCTVVAKPASQTPFSGLAWGVLGEMAGLPAGVLNIVTGSARAIGGELTANPSVRKITFTGSTPVGKVLLAQ
AAGTVKKMSMELGGNAPFLVFDDADLDRAVEGAIAAKFRNAGQTCVCTNRFYAQAGIHDEFVKRLAAATAALKVGPGAQD
GSEIGPLIDAAAVAKTEEMVADATAKGGRIVTGGRRHTAGAGFYEPTVIADATDAMTFAREEIFGPVAPVFRFETEEEAI
RRANATEYGLACYFYTSDLGRAFRVSEALDYGIVGVNEGLVTTEVAPFGGVKESGFGSEGSHHGMQDYLTLKYTAMGGLG
R

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 4e-126 58