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Name : Noc_0919 (Noc_0919) Accession : YP_342961.1 Strain : Nitrosococcus oceani ATCC 19707 Genome accession: NC_007484 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1010149 - 1012740 bp Length : 2592 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGCCAGCAAATGACCCTCAGAAACCCCATACGCCTATGATGCAGCAGTATCTGCGGATAAAGGCAGAGTATCCCAATAC GCTCTTGCTCTATCGCATGGGGGACTTCTACGAATTGTTTTATGACGATGCTCAACGCGCCTCGGAACTATTGGATATCG CGCTTACCAGCCGTGGCCGATCGGCCGGCGAGCCCATTCCCATGGCAGGAATTCCCTACCATGCGTTGGATTCCTATTTG GCAAGGTTAGTGCGCCAGGGGGAGTCGGTAGCCATCTGCGAGCAGATAGGCAATCCGGCGGCAAGCAAGGGTCCCGTGGA ACGCCAAGTGGTGCGAATCATTACCCCCGGAACGGTGACCGAGGAAGCCCTCTTGGAAGCCCGCCGGGATAATCTGCTAG CCGCACTTCAGAAAGAGGGGGATGTTTTTGGATTTGCTGTGCTTGATCTTTGCAGTGGGCGCTTCAATATTCTAGAAGTA GCTAGTGAATCGGCGGCTACTAGCGAATTAGCCCGCATCCGGCCAGCGGAACTTTTGGTAAGCGAAGACCTAGCGCTTAT CCTGGTCGATTCCAAAACTGAGGCGGTGGTGCGACCCTTGCCTCCCTGGTATTTTGATAGGGAAAGCGCCCAGCGCCAGC TATGTCGGCAGTTTGGGACTCAAGACCTAGCCGGTTTTGGCTGCGAGGAAATGAAAACCGCAATTGCCGCCGCCGGGTGC CTGCTGCATTATGTCCAGGATACCCAACGCACCCAATTTCCCCACATTCACGCACTCCAAGTCGAGCGACAAGAAACCAG CATTATTCTGGACCCCAGCACTCGGCGCAATCTAGAATTAGAAGAAAGCCTGAGCGGCGATTCGGGCCGTAATACCTTAA TCGCGGTACTGGACCATACGGCAACCGCCATGGGCAGCCGCCTGCTACGGCGCTATCTCCACCGTCCTCTGCGGGATCAA ACCCTGCTCAAACAACGCCAACAGGCGCTTGCTACTCTCCTAGAAGGAGGACTGAGCGATGTTTTACAAACATTACTCCG GGGAATAGGCGATATTGAACGCATTCTCTCCCGCGTGGCCTTGCGTTCCGCCCGTCCGCGAGATCTCGTCCAATTTCGGC AAGCCTTGGGTCTATTACCCAAGATCCAAGAGAGCTTGTTGCAGTTAAACAGAGACAGCCTTTTACTTCAGTCGCTACAA GAAGATTTGGGTCCCTTTCCCAATCTCCATGAACTGTTACAACGGGCCATTTGTGAAAATCCGCCGGTGCTCATTAGAGA TGGCGGGGTAATTGCCCTCGGCTTTGACTCGGAACTAGATGAATTGCGGCATTTAAGCGGCAATGCCGGGCAATTTTTAG TGAAATTGGAGCAGCGGGAGCGGGAGCGCACCAAAATCCCAACTCTCAAGGTAGGCTACAACAAAGTTCATGGCTACTAT CTTGAGATCACACGTGCTCAGGCCCATCAAGCGCCTCCTGACTATATTCGTCGTCAAACCTTAAAGGGGGCGGAACGCTA TATTACCCCGGAATTGAAAGGCTTTGAAGACCAGGTGTTAAGCGCCCGAGAACGGGCGCTGGCGCGGGAAAAAGCCCTTT ACGAGGAGCTATTGGAACAATTTATGGAACCCCTCCCCGCTTTGCGGGCCTGCGCCAACGCCTTGGCGGAGCTGGATGTG CTTCATAACCTGGCCGAGCGGGCTAAAACCTTGGAATATGTGGCACCCCTATTGAGCGATCAGCCAGGGATATTTATCGA AAGGGGCCGCCACCCGGTGGTGGAACAAACCCTAGAGGATCCTTTTGTGCCTAATGATCTGACTCTCCATGAAGCACGGC GGATGCTGATCATTACCGGCCCCAATATGGGAGGAAAGTCTACGTACATGCGCCAGACAGCCTTAATTGTCTTGCTCGCC CATATTGGCAGTTTTGTGCCAGCCCGCCGGGCTGTCATTGGCCCTATTGACCGAATTTTTACCCGTATCGGCGCAGCCGA TGATCTTGCCGGGGGACGCTCCACTTTTATGGTCGAAATGACCGAGACCGCCAACATTCTACATAATGCGACTGAGCACA GCTTAGTCTTGCTGGATGAGGTTGGCCGGGGCACCAGTACTTTCGACGGTCTATCTCTCGCTTGGGCAGTGGTCTCCCAC CTGGCAAACAAAGTGCGTTCCCTAACGCTATTTGCGACCCATTACTTTGAGCTCACCACTCTTCCCGAGTGTCTTCCCGG CGTGGTTAATCTTCACCTTACAGCAACCGAGCATAAGGAGCATATCGTTTTTCTCCATGCGGTGAAAGAAGGTCCTGCCA GCCAAAGTTATGGCCTTCAGGTAGCCGCATTGGCGGGTGTGCCCCAGGAGATCATTGCCCAGGCGCGGCAACAGCTTATG GAATTAGAAAACAATACTTGGCAAAAATCGATCAATGGAGGCGGCCCTCAACTAGACTTGCTTGCGCCCCCTGCGGATCA TCCTGCCGTTCAAATACTACAAGATTTAGACCCCGATGAACTTACTCCCCGGCAAGCTTTAGAGAAACTCTACGAACTCA AACAGCTATTAGACCTTGCTGTTACACACTAA Protein sequence : MPANDPQKPHTPMMQQYLRIKAEYPNTLLLYRMGDFYELFYDDAQRASELLDIALTSRGRSAGEPIPMAGIPYHALDSYL ARLVRQGESVAICEQIGNPAASKGPVERQVVRIITPGTVTEEALLEARRDNLLAALQKEGDVFGFAVLDLCSGRFNILEV ASESAATSELARIRPAELLVSEDLALILVDSKTEAVVRPLPPWYFDRESAQRQLCRQFGTQDLAGFGCEEMKTAIAAAGC LLHYVQDTQRTQFPHIHALQVERQETSIILDPSTRRNLELEESLSGDSGRNTLIAVLDHTATAMGSRLLRRYLHRPLRDQ TLLKQRQQALATLLEGGLSDVLQTLLRGIGDIERILSRVALRSARPRDLVQFRQALGLLPKIQESLLQLNRDSLLLQSLQ EDLGPFPNLHELLQRAICENPPVLIRDGGVIALGFDSELDELRHLSGNAGQFLVKLEQRERERTKIPTLKVGYNKVHGYY LEITRAQAHQAPPDYIRRQTLKGAERYITPELKGFEDQVLSARERALAREKALYEELLEQFMEPLPALRACANALAELDV LHNLAERAKTLEYVAPLLSDQPGIFIERGRHPVVEQTLEDPFVPNDLTLHEARRMLIITGPNMGGKSTYMRQTALIVLLA HIGSFVPARRAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTETANILHNATEHSLVLLDEVGRGTSTFDGLSLAWAVVSH LANKVRSLTLFATHYFELTTLPECLPGVVNLHLTATEHKEHIVFLHAVKEGPASQSYGLQVAALAGVPQEIIAQARQQLM ELENNTWQKSINGGGPQLDLLAPPADHPAVQILQDLDPDELTPRQALEKLYELKQLLDLAVTH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Noc_0919 | YP_342961.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 61 |
