Gene Information

Name : Noc_0785 (Noc_0785)
Accession : YP_342828.1
Strain : Nitrosococcus oceani ATCC 19707
Genome accession: NC_007484
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 858066 - 859436 bp
Length : 1371 bp
Strand : +
Note : -

DNA sequence : 
ATGAATCAAATGACTGAAAATAACAGAGTTTTATTGGTAGATGATGATTGTGATTTGTTGTCGTTGCTCTCCATTCGTTT
AGAGAACGGTGGCTATGAACCTGTTCGAGCGGAAAGCGGAGAAGAAGCGTTAGCCCAGGTAGAGCTGGCCCGTCCCCAAG
CCGTGATCACGGATTTGCGAATGGGAGGCATGGATGGGATGGCGCTAGCGGATTGCATTCACCGGAAAAATCCGGCATTA
CCGGTGATTATTCTTACCGCCCATGGTTCCATCCCCGATGCGGTGCAGGCTACTAAAAATGGGGTTTTTGCTTTTCTGAC
CAAGCCTTATAATAGCCGGGAGCTATTGAGTCAATTGGAAAAGGCACTTCGTGTTTCAGGTATTTGCCGCGACTTGGAAG
AAACCACCCCGGAGAGTTGGCGCGAGGAAATTGTCACCCGCAGCCCGTTGATGGAGGATCTGCTCAGCCAGGCCCGACTG
GTGGCCGAAAGCGAGGCCAGCATTTGTTTACGGGGCGATAGTGGAACAGGTAAGGAATTACTGGCTAAAGCTATTCACAA
GGCGAGCCCGCGCAGTAAGCAGCCTTTTATTGCCGTTAACTGCGCGGCGATTCCGGAGTTATTGTTGGAATCTGAGTTAT
TTGGTCACGCCAAGGGTGCATTTACTGGCGCCACCCGGGATCATCCAGGATTATTTCAGGCTGCCCATGGTGGTACATTA
TTTTTAGATGAAATTGGCGATATGCCGGTTGCGCTCCAGGTAAAATTGCTGCGGGCACTACAAGAGCAGCAAGTACGGCC
GGTAGGAAACACCTCTACGGTAAGCGTGGATGTGCGCATTATCTCGGCCACCCACAAAGATCTGGATGCGGAGGTGCGGG
ATGGAAACTTCCGGGAGGATCTTTATTACCGGCTTAATGTTGTGATCTTGGAAATTCCCTCTCTCGCTGAACGGCGGGAA
GATATTCTGTTTCTTGCCAATCATTTCTTACACACCTTTCGGCGTGGAAGCAAAAAAAACATTCGAGGATTCTCGGCTGA
GGCAATTGAGCTATTGGTTAGCGCCCCTTGGCCGGGCAATGTCCGTCAGTTATGTAATGTGGTGGAGCAAACCGTGGTTT
TGTCAACCACGCCTATCATTTCCGCCAAACTGGTAAAAAAAGCGCTGCGTCAGCAGTCAGGCCAATTTCCTTCCTTTGCT
GATGCGCGGAGGCAATTCGAGCAGGAATATCTTGCGGGTCTACTTAAAATTACCGATGGTAATGTGACTCGGGCGTCCCG
GTTAGCCCGGCGTAATCGCACCGATTTTTATAAGCTTCTCCAACGTCATACTTTGGATCCTGCCGATTTTAAGCCTGCCA
AATCTCAGTGA

Protein sequence : 
MNQMTENNRVLLVDDDCDLLSLLSIRLENGGYEPVRAESGEEALAQVELARPQAVITDLRMGGMDGMALADCIHRKNPAL
PVIILTAHGSIPDAVQATKNGVFAFLTKPYNSRELLSQLEKALRVSGICRDLEETTPESWREEIVTRSPLMEDLLSQARL
VAESEASICLRGDSGTGKELLAKAIHKASPRSKQPFIAVNCAAIPELLLESELFGHAKGAFTGATRDHPGLFQAAHGGTL
FLDEIGDMPVALQVKLLRALQEQQVRPVGNTSTVSVDVRIISATHKDLDAEVRDGNFREDLYYRLNVVILEIPSLAERRE
DILFLANHFLHTFRRGSKKNIRGFSAEAIELLVSAPWPGNVRQLCNVVEQTVVLSTTPIISAKLVKKALRQQSGQFPSFA
DARRQFEQEYLAGLLKITDGNVTRASRLARRNRTDFYKLLQRHTLDPADFKPAKSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 1e-61 43
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 1e-61 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Noc_0785 YP_342828.1 Fis family transcriptional regulator BAC0467 Protein 1e-79 51
Noc_0785 YP_342828.1 Fis family transcriptional regulator BAC0089 Protein 5e-77 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Noc_0785 YP_342828.1 Fis family transcriptional regulator VFG0116 Protein 4e-60 43
Noc_0785 YP_342828.1 Fis family transcriptional regulator VFG1249 Protein 3e-63 43