Gene Information

Name : Noc_0723 (Noc_0723)
Accession : YP_342767.1
Strain : Nitrosococcus oceani ATCC 19707
Genome accession: NC_007484
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 781682 - 783016 bp
Length : 1335 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGGGACGCCCCGTGGTCCTTATAGTGGACGATGAGCCGGATATTCTGGAATTACTGGAGCTTACCCTGGCGCCCTT
GGGTGTTGTCTGCCAAAAAGCGAGTGATCTTGCCAGGGCCCGTCAGCATCTGCAGCAACAGTCCTTCGATTTCTGTTTGA
CTGATATGCGTCTTCCGGATGGAGATGGCATCGAGCTGGTTAGGCTGATTAGTCAGTACTGCCCGGAAACGCCAGTGGCG
GTGATTACCGCCCATGGCAACGTGGAGACTGCCGTTGCGGCCTTGAAAGCTGGCGCTTTTGATTTTATCTCAAAACCGGT
GGATTTACAGGCGCTGCGCAATCTGGTCAAGAGGGCGCTAAAACTTCCTCTTTCCTATCCCAAAATGGAAAGGCGAACCC
GCCACCGGTTACTTGGGGAGTCGGCCGCCATGCGGGGAGTGCGCGCCCAAATTGCCAAGCTGGCCCGTAGTCAAGCGCCG
GTTTACATTAGTGGCGAATCGGGCACGGGTAAGGAACTAGTTGCTAGGCTTATCCATGAGCAAGGGCCCCGTTCGGCGGG
TTCCTTCGTACCTGTCAATTGCGGCGCTATACCCACCGAGCTGATGGAAAGTGAATTTTTTGGTCATAAAAAGGGCAGTT
TTAGTGGCGCTGTTGGTGATCAGGAGGGGTTGTTTCACGCCGCGGATGGGGGCACCCTGTTTTTGGATGAAGTGGCCGAT
TTATCTCTCCCCATGCAGGTCAAGCTTCTGCGGGCTATCCAGGAGAAGAGCGTGCGGCCCATCGGCAGCCAGAAAGAAAT
TGCCGTTGATGTCCGTATTCTTTGTGCTACCCATAAAGATCTGGCTACCTTGGTGCGACAAGGCAACTTTCGCCAGGATC
TTTTCTACCGGCTCAATGTTATTGAATTGGCTGTTCCTTCCTTGAGACAGCGGACAAGTGATATTTTCCAGCTAGCCGGA
CACATCTTGAACAGGCTCGCCGAGACCCATGGGGATACTCCTTTTAAACTGGCGCCCGATGCTTTGGCAGCGTTGCAAGC
TTATCTCTTTCCCGGCAATGTGCGAGAGCTGGAAAATATTTTGGAGCGGGCCGTAACACTATGCGAATCCGAAACCATTG
GGGCAAAGGATCTGCGCTTGCCCCAAGTAGAATTGCCTAGTACCTCAGCATTCCTTCCTGCAAATTCTTTAGAAGAGCAT
TTAGCGGGATTAGAAAAACAGGCTATTCTCCAAGCTCTCGAACAAACCCGCTACAATAAAACCGCTGCTGCTAAAATTCT
AGGCATTACCTTCCGCGCCTTACGTTACCGGTTAAAAAAACTGGAGCTAGAATAA

Protein sequence : 
MKGRPVVLIVDDEPDILELLELTLAPLGVVCQKASDLARARQHLQQQSFDFCLTDMRLPDGDGIELVRLISQYCPETPVA
VITAHGNVETAVAALKAGAFDFISKPVDLQALRNLVKRALKLPLSYPKMERRTRHRLLGESAAMRGVRAQIAKLARSQAP
VYISGESGTGKELVARLIHEQGPRSAGSFVPVNCGAIPTELMESEFFGHKKGSFSGAVGDQEGLFHAADGGTLFLDEVAD
LSLPMQVKLLRAIQEKSVRPIGSQKEIAVDVRILCATHKDLATLVRQGNFRQDLFYRLNVIELAVPSLRQRTSDIFQLAG
HILNRLAETHGDTPFKLAPDALAALQAYLFPGNVRELENILERAVTLCESETIGAKDLRLPQVELPSTSAFLPANSLEEH
LAGLEKQAILQALEQTRYNKTAAAKILGITFRALRYRLKKLELE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 6e-98 49
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 6e-98 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Noc_0723 YP_342767.1 Fis family transcriptional regulator BAC0467 Protein 9e-75 47
Noc_0723 YP_342767.1 Fis family transcriptional regulator BAC0089 Protein 6e-68 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Noc_0723 YP_342767.1 Fis family transcriptional regulator VFG1214 Protein 2e-124 63