Gene Information

Name : Noc_2916 (Noc_2916)
Accession : YP_344892.1
Strain : Nitrosococcus oceani ATCC 19707
Genome accession: NC_007484
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 3297601 - 3299160 bp
Length : 1560 bp
Strand : -
Note : -

DNA sequence :
ATGGCTAACAATCAAACTACCCAAGTTAAAGAAAGGGAAACCGAGTCCACGACCGGTAAACTTTACGATCGCCCTGAATT
CAAAGACCATTACGATAATTTTATCGGCGGCAAATTTGTAGCGCCTGTCGATGGTGAATATTTTGATGATATTGCGCCGA
TGGATGGCAAGCCGTTTACCAAGGTAGCACGTTCTAACGAAAAAGATATTGAACTTGCGCTTGATGCCGCCCACAAGGCA
GCAAAAGACTGGAACCAGGCTTCTGCCGCCGAGCGAAGTAAGGTACTGCTCGATATTGCAGATATTATCGAAGAAAATCT
CGAATATCTAGCGCGTGTAGAAACCGTCGAAAACGGCAAGCCCATCCGTGAAACCTTAAATGCCGACCTTCCGCTGGCGG
TAGATCACTTCCGCTATTTTGCCGGCGTCATCCGCGCCGAAGAAGGCGGCATCTCCGAGCTGGATAAAGACACCGTAAGC
ATAAATTTGCCCGAGCCCCTGGGCGTGGTGGGACAAATCATACCGTGGAATTTCCCACTGCTGATGGCTACCTGGAAAAT
GGCCCCTGCCCTGGCCGCAGGTAACTGTACGGTGATAAAAGCTGCTGAACAGACACCGGCCAGCATCATTATTTTGGCCG
ATCTGATCAAAGAGGTAGTGCCCAACGGCGTATTGAATGTAGTTAACGGATTTGGCTCCGAGGCGGGCAAACCGCTGGCT
TCTTCGCCCCGGATTGCTAAAGTTGCATTTACCGGCGAAACTACAACTGGACGGCTCATTATGCAGTATGCCTCCGAAAA
TCTGATACCCGTTACGCTTGAGCTGGGCGGCAAAAGTCCGAATGTATTTTTCGAAAGCGTGATGAATGCCGACGACGATT
TTTTCGACAAGGCACTGGAGGGGGCCGCTATGTTTGCCCTTAACCAGGGAGAAGTTTGTACCTCTCCTTCCCGTATACTC
GTGCAGGAGTCGATTGCCGATGCATTTATTGAACAGGTTGTGGAAAGGGTTAAAAAAATAAAGGTAGGCAATCCACTAAA
CTCCGAAACCATGGTTGGTGCACAAGCCTCCAATGATCAATTTGAGAAAATTCTCAACTACCTGGAGATCGGCCGGGAAG
AAGGCGCGCAAGTCCTGACCGGAGGTCAAAAAGCAAATGTAGGCTCCAACGGCACTTCCGGCGGCTACTATATTGAACCG
ACGATCTTTAAGGGACACAATAAAATGCGCGTGTTCCAGGAAGAGATTTTCGGTCCGGTAGCCTCTCTGACAACCTTCAA
GGATGAAGCCGATGCTATCGCTATTTCTAACGAAACACTTTATGGACTGGGAGCAGGCGTATGGACACGCGATGCACACC
AGTTGTACCGCATTCCTCGGGCTATTAAAGCAGGCCGTGTGTGGGTAAATTGCTATCATCACTATCCTGCACATGCGGCC
TTCGGCGGATATAAAAAATCCGGCTTTGGCCGGGAAAATCACAAGATGATGCTCGATCATTATCGGCAGACGAAAAATAT
GCTCGTCTCTTACGATAAGAAAGCACAGGGCTTCTTCTAA

Protein sequence :
MANNQTTQVKERETESTTGKLYDRPEFKDHYDNFIGGKFVAPVDGEYFDDIAPMDGKPFTKVARSNEKDIELALDAAHKA
AKDWNQASAAERSKVLLDIADIIEENLEYLARVETVENGKPIRETLNADLPLAVDHFRYFAGVIRAEEGGISELDKDTVS
INLPEPLGVVGQIIPWNFPLLMATWKMAPALAAGNCTVIKAAEQTPASIIILADLIKEVVPNGVLNVVNGFGSEAGKPLA
SSPRIAKVAFTGETTTGRLIMQYASENLIPVTLELGGKSPNVFFESVMNADDDFFDKALEGAAMFALNQGEVCTSPSRIL
VQESIADAFIEQVVERVKKIKVGNPLNSETMVGAQASNDQFEKILNYLEIGREEGAQVLTGGQKANVGSNGTSGGYYIEP
TIFKGHNKMRVFQEEIFGPVASLTTFKDEADAIAISNETLYGLGAGVWTRDAHQLYRIPRAIKAGRVWVNCYHHYPAHAA
FGGYKKSGFGRENHKMMLDHYRQTKNMLVSYDKKAQGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-136 61
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-141 61
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-141 61
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-141 61
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-140 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Noc_2916 YP_344892.1 aldehyde dehydrogenase VFG0082 Protein 1e-136 61