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Name : Noc_2895 (Noc_2895) Accession : YP_344871.1 Strain : Nitrosococcus oceani ATCC 19707 Genome accession: NC_007484 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3272426 - 3274168 bp Length : 1743 bp Strand : - Note : - DNA sequence : GTGGCGCAACAACTTGGCAAAACTATTCCTATTACGCCTGCTCCTGAAGAGGAGGCGGTTCCCCAAAGCCTGGAGGAAAA GCTTGGCGAGTATTTGATTGAGCGGCGCAAGCTGCGGGCAGGTGAATTCCGCCATGCCTGGCGTTTGGCGGAGGAGGAAG GGCTGCGGCTTTCCGTTATGCTCATAAGGCTGGGGTTGATCTCGGAGCGGGATATGGCGGAAGCCTTTTCCGCCTTGCTC GATCTGCCGCTGCTAGCAACGAACGATTATGATAATAGCGATCTGAACGGTCAAGTTTCATTGCGGTTCCTCAAAGAATT CCGGGCCATTCCCGTGCTGGAGGAAGAGGAGGCAGTGGTGCTGGCGATGGCCGACCCTAGTGATGATTATGTCCAGGAAG CCATTGCCCTGGCTTACAGCAAGCCCATCAGTCTGCGGGTCGGTTTGCCTTCGGATATTGAAGCGGCCCTTGATCGTCAG GCCGGGGGAAAATCGGCCATGGGACAGATCGTCGAACATCTGGGGGCGGACGAAGATGGGGAAACCGATGTCCAGCACCT GAAGGATATGGCCAGCGAGGCCCCGGTCGTCCGCCTGGTGAATTTGTTGATTCAGCGTGCGGTGGAATCCCGAGCTTCGG ATATCCATATCGAGCCTTTTGAAAACAGTCTTCGGGTCCGCTACCGGATCGATGGCGTGTTGCGGGATGTAGAGGCCCCC CCGGCGCGTTCCACCGCTGCTGTGATTTCCCGCTTCAAGATTATGGCTAAGCTTAATATCGCTGAGCGGCGATTACCCCA GGATGGGCGAATCCAGCTTCGTATCCAAGGGCGGGAGCTGGACTTGCGGGTCTCGACAGTGCCGACTCTGTATGGCGAGA GCGTGGTGCTTCGGCTGCTAGATAAAGGCAATGTGGTGCTGGATTTCGACTCCCTGGGCTTCCAGGGAAGTACCTTGGAG CGTTTTTTGCATGTATTGGAACAGCCCCATGGAATTATTGTCGTCACGGGTCCCACAGGTAGTGGTAAAAGCACCACCCT TTATACCGCGTTGCATAAACTCAATACTCCAGACCGAAAAATTGTAACGGTGGAAGATCCGGTGGAGTATCAGCTTGAAG GGATCAACCAAATCCAGGTTAAACCGCAGATTGGCCTTACTTTTGCGGGTGCTTTGCGGTCTATCGTGCGCCAAGATCCG GATGTCATCATGATTGGTGAAATGCGGGATAAGGAGACTGCTGGCATCGCGGTTCAATCGGCCCTGACGGGTCATGTGGT GCTCTCCACTCTCCATACCAATGATGCGGCTGGAGGGGTTACCCGCTTATTGGATATGGGAATAGAGGATTATCTGCTGA CCTCCACTGTCAATGGTATTTTGGCCCAACGCTTGGTACGCACTCTCTGTAAACATTGCAGTGAACCTTACGAGGCCCTG CCTGAACTTATAGAGGAGCTGGAATTGCATCGCTTCAGCCAGGAGAAACCCGTGATGTTGCATCGGGCCGTTGGCTGCGA GCAATGTAACGGGATTGGTTATCATGGGCGGGCGGCGATCATGGAATTTCTGGTGATGAGCGATCCTATCCGCCGTCTTG TGCTCCAGCATACCGATGCGGGGGAGATTCAAAAGCAAGCTCAGAAAGAAGGCATGCGTATTATGTATGAAGATGGTCTT CATAAAGCACTCTCTGGCTTCACTACTATTGAAGAGGTGATCCGAGTCAGCCAGGAATCGTGA Protein sequence : MAQQLGKTIPITPAPEEEAVPQSLEEKLGEYLIERRKLRAGEFRHAWRLAEEEGLRLSVMLIRLGLISERDMAEAFSALL DLPLLATNDYDNSDLNGQVSLRFLKEFRAIPVLEEEEAVVLAMADPSDDYVQEAIALAYSKPISLRVGLPSDIEAALDRQ AGGKSAMGQIVEHLGADEDGETDVQHLKDMASEAPVVRLVNLLIQRAVESRASDIHIEPFENSLRVRYRIDGVLRDVEAP PARSTAAVISRFKIMAKLNIAERRLPQDGRIQLRIQGRELDLRVSTVPTLYGESVVLRLLDKGNVVLDFDSLGFQGSTLE RFLHVLEQPHGIIVVTGPTGSGKSTTLYTALHKLNTPDRKIVTVEDPVEYQLEGINQIQVKPQIGLTFAGALRSIVRQDP DVIMIGEMRDKETAGIAVQSALTGHVVLSTLHTNDAAGGVTRLLDMGIEDYLLTSTVNGILAQRLVRTLCKHCSEPYEAL PELIEELELHRFSQEKPVMLHRAVGCEQCNGIGYHGRAAIMEFLVMSDPIRRLVLQHTDAGEIQKQAQKEGMRIMYEDGL HKALSGFTTIEEVIRVSQES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-92 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-92 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Noc_2895 | YP_344871.1 | type II secretion system protein E | VFG0182 | Protein | 2e-94 | 48 |
| Noc_2895 | YP_344871.1 | type II secretion system protein E | VFG2048 | Protein | 8e-93 | 46 |
| Noc_2895 | YP_344871.1 | type II secretion system protein E | VFG0112 | Protein | 2e-89 | 44 |
