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Name : Noc_2840 (Noc_2840) Accession : YP_344816.1 Strain : Nitrosococcus oceani ATCC 19707 Genome accession: NC_007484 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 3215977 - 3216756 bp Length : 780 bp Strand : + Note : - DNA sequence : ATGTCCTACAAAGTCATTATCCCCGCCCGTTATGGCGCTAGCCGCCTACCAGGTAAGCCGCTGCTCGATTTGGCGGGTAA ACCTATGTTGCTGCATGTCGTGGAAAAAGCTCAAAAAAGCGGTGCTGAAGAAGTCCTAGTTGCCACTGATGATAGGCGTA TAGAGGCAATCGTCCAAAACCATGGTGTGCAAGTCTGTATGACCTCAGTCCAACATGACTCTGGAACTAACCGCTTAGCA GAAGCGGTAACGCAAAAAGATTATCCAGATCAAACCATTATTATCAATGTCCAGGGCGACGAGCCTCTTTTGCCTCCCTC CCTGATTACTCAAGCGGCGGAAGACCTAAAAACCCATCCCAAGGCGGATATTGCTACCTTGTGTGTACCTATTGCTAACC GAGAGGAGTTGTTTGATCCTAATATCGTTAAAGTAGTTCGGGATATACAAGGCTATGCCCTTTACTTCAGCCGGGCCCCT ATTCCCTGGGCAAGAGAAGACTTTGCCGCTAAAACTGGGAACCGCTGGCCCACCTCCTGGTCTTATTATCGCCATGTCGG ACTTTACGCTTATCGTGCAAGTTTCTTGCGGCGCTATCCCCAACTTCCTGTCTCCCCCCTGGAGCAGGCCGAATGCTTGG AGCAACTGCGGGTCTTATACCATGGAGGTCGCATCCATGTGGCTATCGCCGGTACAATTCCTCCTCCAGGGGTAGACACC CTGGCTGACTTGGAACGGGTGAGGCAACTGCTAGTAACCCAGGAAAGAAACCACAACTAA Protein sequence : MSYKVIIPARYGASRLPGKPLLDLAGKPMLLHVVEKAQKSGAEEVLVATDDRRIEAIVQNHGVQVCMTSVQHDSGTNRLA EAVTQKDYPDQTIIINVQGDEPLLPPSLITQAAEDLKTHPKADIATLCVPIANREELFDPNIVKVVRDIQGYALYFSRAP IPWAREDFAAKTGNRWPTSWSYYRHVGLYAYRASFLRRYPQLPVSPLEQAECLEQLRVLYHGGRIHVAIAGTIPPPGVDT LADLERVRQLLVTQERNHN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 9e-42 | 48 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 5e-42 | 48 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 7e-42 | 48 |
