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Name : Noc_2788 (Noc_2788) Accession : YP_344765.1 Strain : Nitrosococcus oceani ATCC 19707 Genome accession: NC_007484 Putative virulence/resistance : Virulence Product : sugar phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 3163140 - 3164132 bp Length : 993 bp Strand : + Note : - DNA sequence : ATGCCTGTTGCATACAATGATGATATGGATAAGCGGCTTATTCAACTAGGAGCGGCTGTTATCGACACTGAGGCCCATGC GATAGCAGCGCTACGAACGCGAATCAATGGGAACTTTGCTGCCGCCTGTAAATACATGCTGGCATGCGAAGGCCGTATCG TTATATTAGGGATGGGTAAATCAGGCCATATTGGCGGCAAAATTGCCGCTACTCTTGCCAGTACGGGTACGCCAGCTTTT TTCGTCCACCCTGGTGAGGCCAGCCACGGGGATCTGGGTATGATTACCGAAAAGGATGTGGTACTAGCACTGTCAAATTC TGGAGAGACGGAAGAAATCTGTACGATTCTCCCTCTCATCAAACGCTTAGGCGTTCCACTGATTGCCTTAACTGGCCAGC CCCGGTCAACTCTAGGAAAGGTTGCTGACATCCACATCGATATTAGCGTCGAAAAAGAAGCCTGCCCTCTCGGACTAGCG CCGACGGCCAGCAGCACAGCAACTTTAGCCATGGGCGATGCCCTGGCCATTGCCTTGCTGGAAAGCCGGGGGTTCACTGC AGAGGATTTTGCTCGTTCCCATCCGGGCGGTCGTCTGGGGCGCCGCCTCTTACTTCGCATTAGCGATATCATGCATAAAG GCGAGGAAATTCCGGCTATCCCAGAAAATGTGCTATTGAGCAGCGCTTTGCTAGAAATGACTCGCAAAGGGTTAGGAATG ACGGCTGTGGTCAATGCTCAAAACCACGCCGTAGGAATCTTTACCGATGGCGATTTGCGTCGCGCTCTTGATCAGGGAAT CGATGTCCATATTACCCCAATTGCCAAAATCATGACCGCCAATTGTAAAACCCTAGGTCCGGATCTGCTCGCCGCTGAAG CGTTGCAAATAATGCAGCGTCATCGTATTAATGCACTCCTCGTAGTAGACACTGAGCAACGCTTAATTGGCGCCCTCAAT ATGCATGATTTGCTTCGAGCCGGTGTCTTGTAA Protein sequence : MPVAYNDDMDKRLIQLGAAVIDTEAHAIAALRTRINGNFAAACKYMLACEGRIVILGMGKSGHIGGKIAATLASTGTPAF FVHPGEASHGDLGMITEKDVVLALSNSGETEEICTILPLIKRLGVPLIALTGQPRSTLGKVADIHIDISVEKEACPLGLA PTASSTATLAMGDALAIALLESRGFTAEDFARSHPGGRLGRRLLLRISDIMHKGEEIPAIPENVLLSSALLEMTRKGLGM TAVVNAQNHAVGIFTDGDLRRALDQGIDVHITPIAKIMTANCKTLGPDLLAAEALQIMQRHRINALLVVDTEQRLIGALN MHDLLRAGVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 5e-43 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 8e-43 | 43 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 3e-43 | 42 |
