Gene Information

Name : Noc_2637 (Noc_2637)
Accession : YP_344620.1
Strain : Nitrosococcus oceani ATCC 19707
Genome accession: NC_007484
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : 1.1.1.22
Position : 2991590 - 2992867 bp
Length : 1278 bp
Strand : +
Note : -

DNA sequence : 
GTGCTAACATTAAAAGAGATACGAGTCGGAATTCTCGGGCTAGGTTATGTGGGGCTCCCCCTGGCGGTGGAATTTGGCAA
AAAGTTTCCCACCATGGGGTTTGATATCAATCCAAGGCGTATTGCGGAGCTAAAGGAGGGACGTGACAGTACCCTGGAAG
TAGAACCTGAATTATTGGCAGCAACCACTCAGCTCCAATATACCCACCAGGCACAAGATTTAATTGATTGCAATGTCTAC
ATTATCACTGTTCCTACGCCGATTGACGAATATAAACGCCCCGATCTCCGCCCCTTGGAAAGTGCAAGCCATACGGTAGG
CAAAGTGCTCAAACGGGGGAATATCGCCATTTTTGAATCTACCGTTTATCCAGGAGCTACCGAAGAAATTTGTGTTCCTA
TTCTGGAACGTGAATCAGGACTTACCTATAACCAAGAATTTTTTGCAGGTTATAGCCCCGAACGAATCAATCCAGGAGAC
AAGCAACATCGGGTGGCTTCTATCTGCAAAGTCATATCAGCCTCGACGGTTGAGGCCACAGAATTAGTGGATGAGATCTA
TGCCAGTATTATTACTGCAGGCACCCATAAAGCGAACAGCATCCGTGTTGCTGAAGCGGCCAAAGTAATTGAAAATACCC
AGCGGGATGTCAATATTGCCCTAATCAATGAATTAGCAATGCTCTTTAACCAACTTGGTATTGATACCCAGGAGGTCCTG
GAAGCAGCAGCGACCAAGTGGAATTTCTTGCCATTTCGCCCCGGACTGGTTGGCGGGCACTGTATTGGTATCGATCCATA
TTACCTCACTCACAAGGCGCAAGCCATCGGCTTCCAACCTGAAATGATCCTCGCCGGCCGCCGAGTCAACGATGGCATGG
GAAGCTACGTTGCTAGTCAAATAGTTAAACTCATGACCCAACGCCGCATCCACGTGGTGGATAGCAGGATATTGATTCTA
GGGCTCGCTTTCAAGGAAAACTGCCCCGATTTACGGAATACTCGGGTGATGGATATTATCGCCGAACTTAAAAACTACCA
TGCTCAAATTGATATTTACGATCCTTGGATAGACGCTAAGGAGGCTAGGCAAGAACATGGAATCACTCTTGTCACTGATT
TAAGAGACGGTTATTACGATGCCATCATCGTGGCGGTAGCTCACCGGCAATTCGCTGAGTTAAAGGCCGCGGGTATTCGC
GCCTTAGGGAAGCCAAGAAGCATTCTCTATGACGTCAAACATCTTCTCCCTAAGGAGGCGGTAGATGGTCGCCTTTAA

Protein sequence : 
MLTLKEIRVGILGLGYVGLPLAVEFGKKFPTMGFDINPRRIAELKEGRDSTLEVEPELLAATTQLQYTHQAQDLIDCNVY
IITVPTPIDEYKRPDLRPLESASHTVGKVLKRGNIAIFESTVYPGATEEICVPILERESGLTYNQEFFAGYSPERINPGD
KQHRVASICKVISASTVEATELVDEIYASIITAGTHKANSIRVAEAAKVIENTQRDVNIALINELAMLFNQLGIDTQEVL
EAAATKWNFLPFRPGLVGGHCIGIDPYYLTHKAQAIGFQPEMILAGRRVNDGMGSYVASQIVKLMTQRRIHVVDSRILIL
GLAFKENCPDLRNTRVMDIIAELKNYHAQIDIYDPWIDAKEARQEHGITLVTDLRDGYYDAIIVAVAHRQFAELKAAGIR
ALGKPRSILYDVKHLLPKEAVDGRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-133 61
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-133 61
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-105 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Noc_2637 YP_344620.1 UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 5e-134 61