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Name : hslU (Noc_2341) Accession : YP_344329.1 Strain : Nitrosococcus oceani ATCC 19707 Genome accession: NC_007484 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 2685411 - 2686754 bp Length : 1344 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGCCCGAACTAATCCCCCAGCAAGAACTAACCCCTCGGCAAATTGTTCAGGAACTGGATAAACATATTATTGGACAAAC CGCTGCTAAGCGGGCTGTTGCTGTTGCCCTCCGTAACCGCTGGCGTCGGCGCCAGGTGAGTGAAGAGCTGCGCAACGAAA TCACTCCCAAAAATATTCTTATGATTGGCCCCACCGGCGTGGGTAAAACCGAGATTGCCCGGCGCCTTGCAAAACTAGCG AATGCTCCCTTTATGAAAGTCGAAGCAACTAAGTTTACCGAAGTAGGCTATGTTGGCCGAGACGTAGAATCCATCATTCG GGATCTCGTGGACATTGCCATCAAAATAACTCGCGAGCAGGAAACGGCTAAGGTCCGCAACCAAGCGGAAGATAGAGCAG AGGAGCGAATTCTTGATGCTCTCTTACCCGCTGCACGGGCTGCGCCCCATGATACGATGGATGAAGAATCAAATACTCGG CAAAAATTTCGCAAAATGCTGCGGGAAGGAAGATTAGATGACCGAGAAATCGAGATTGAGTTAGCTGCCGTTTCCATGGG GGTTGAAATTATGGCCCCCCCAGGGATGGAAGAAATGACTAGCCAGCTCCAAAATATGTTCCAAAATTTGGGGGGCACTC GTACCCGAGCGCGCCGACTACGAGTCCGCGAAGCCTTCAAGCTACTGACTGAAGAGGAGGCTGGAAAGCTCATCAATGAT GAAGATTTAAAAGCGCGATCCCTAGAAAATGTGGAACAAAATGGTATTGTATTTCTTGACGAAATGGACAAAATCGCCAA GCGTTCGGAATTCTCTGGTACAGATGTCTCCCGTGAAGGCGTGCAGCGCGATTTACTCCCTTTGGTAGAAGGCAGCGCGG TCTCCACAAAGTATGGTATGGTGCGCACCGACCATATCCTATTTATTGCATCTGGGGCTTTTCATCTAGCTAAGCCCTCA GATCTCATCCCGGAAATGCAAGGACGGTTACCCATTCGAGTTGAGCTAGGCGCCCTTAGCGTTGACGACTTCGTACGTAT CTTAACTGAGCCGAATGCCTCTCTCACTGAGCAATATACTGCATTATTAAAAACTGAAGGAATCTCCTTACATTTCACCG AGGAAGGTATTGCACATATCGCCCAAATCGCTTGGCAGGTTAATGAACGTACCGAGAATATTGGTGCCCGCCGATTGCAT ACTGTCATGGAGCGCCTCCTAGAAGGGCTCTCCTTTGAAGCGGAAAACCATACTAGTAAAAAAGTTATTATTGACGCCGC CTATGTAGATGCTCAGCTAGCCGACTTGGCCCGGGATGAAGACTTGTCACGCTATATCCTCTAG Protein sequence : MPELIPQQELTPRQIVQELDKHIIGQTAAKRAVAVALRNRWRRRQVSEELRNEITPKNILMIGPTGVGKTEIARRLAKLA NAPFMKVEATKFTEVGYVGRDVESIIRDLVDIAIKITREQETAKVRNQAEDRAEERILDALLPAARAAPHDTMDEESNTR QKFRKMLREGRLDDREIEIELAAVSMGVEIMAPPGMEEMTSQLQNMFQNLGGTRTRARRLRVREAFKLLTEEEAGKLIND EDLKARSLENVEQNGIVFLDEMDKIAKRSEFSGTDVSREGVQRDLLPLVEGSAVSTKYGMVRTDHILFIASGAFHLAKPS DLIPEMQGRLPIRVELGALSVDDFVRILTEPNASLTEQYTALLKTEGISLHFTEEGIAHIAQIAWQVNERTENIGARRLH TVMERLLEGLSFEAENHTSKKVIIDAAYVDAQLADLARDEDLSRYIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 3e-93 | 47 |
