Gene Information

Name : lspA (Noc_2276)
Accession : YP_344264.1
Strain : Nitrosococcus oceani ATCC 19707
Genome accession: NC_007484
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 2625545 - 2626009 bp
Length : 465 bp
Strand : -
Note : lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis

DNA sequence :
ATGCTGAAATGGTTGTGGCTCTCTACGCTGGTGATTCTGCTGGATCAAGGGACTAAGTATCTGGCGGAAAATCGGTTGCA
GCCTTACGAGCCGATCCCAGTGGTTCCTTTTTTTAATTTTACCTTAGCTTACAATACCGGCGCGGCGTTTAGTTTCCTGG
CCGATGCCGGTGGTTGGCAGCGGTGGTTTTTTGTAGGGCTGGCGCTCACTGTAAGCGTTGGACTAGTTGTTTGGTTATAC
CGGTTAGGCACCCATGCTCTGTGGGAAGGCATGGCTGTGGCCTTGATCCTTGGCGGAGCCTTGGGTAATGTGATAGACCG
CCTCTGGCATGGTCATGTCATTGATTTTATTGATTTATATTACCAAGGCTGGCATTGGCCCGCCTTTAATATTGCTGATT
CCGCCATTACTGTGGGCGCAGCGGTTCTCATTATACAAAGTCTGTTTAGCAAACCAGCTAGCTGA

Protein sequence :
MLKWLWLSTLVILLDQGTKYLAENRLQPYEPIPVVPFFNFTLAYNTGAAFSFLADAGGWQRWFFVGLALTVSVGLVVWLY
RLGTHALWEGMAVALILGGALGNVIDRLWHGHVIDFIDLYYQGWHWPAFNIADSAITVGAAVLIIQSLFSKPAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 2e-22 50
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 8e-19 48
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 1e-18 48
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 8e-19 48
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 5e-20 46
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 7e-20 46
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 7e-20 46
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 5e-20 46
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 5e-20 46