Gene Information

Name : Noc_2255 (Noc_2255)
Accession : YP_344243.1
Strain : Nitrosococcus oceani ATCC 19707
Genome accession: NC_007484
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2603288 - 2604205 bp
Length : 918 bp
Strand : -
Note : -

DNA sequence :
ATGATAAGCTCTGAACAGGCTCGCTTCTCAGCCGATCAGGGGCACCTGGAGCGCTTTCTGAATGCCTTATGGTTAGAAGA
AGGGCTGGCGGAGAATACTCTAGCGGCTTATCGCCGTGATTTAGAGAGATTTTCCCGCTGGCTGCACTCCCAGGGACGAA
CCCTCATTGGGGCGCAACGGGAAGATTTGCTGGCCTATCTAGCGCACCGCTTGGAAGGGGGCGACAAATCTAGAAGCGTT
GCCCGTTCGGTTTCTAGCCTACGCCGTTTTTACCGTTATCTCATGGGGGAGAAAATCCGCGACAACGACCCCAGTGATCG
TGTGGAGTCCCCTCGGCTTGGGAGGCTCTTGCCCGAGTCATTGAGTGAAGAGGAAGTGGAAGCCTTATTAGCCGCCCCTA
AGACTGAGGATAGCCTGGGACTACGGGATCGAACGATGTTGGAAACTTTATATGCTACCGGACTGCGGGTTTCTGAATTA
GTTAATTTAACTCTTCCTCAATTGAATCCTCGGCAGGGAGTAGTCTATTTAAGTGGTAAAGGCAATAAAGAACGTTTGGT
GCCTTTAGGAGAAGTTGCGCTGAGCTGGCTTGACCGTTATTGCCGTGAAGCCCGTCTAGGATTAGTTAGGAGTCAGGTTA
ATGAAATATTATTCCTGACCCGGCGCGGCGGCGCCATGAGTCGGCAAGCTTTCTGGTATCTGATTAAGCGTTATGCCCGC
CAGTCTGGTATCCAAAAGGCCCTTTCACCTCATACTTTGCGCCACGCTTTTGCCACCCATCTTTTGAATCATGGGGCGGA
TCTGCGGGTAGTGCAAATTTTGCTTGGGCATGCAGACCTTTCGACTACGCAAATTTACACGCACGTGGCTAGAGCTCGTT
TGCAACAGCTTCACCAGCAGCATCATCCTCGCGGCTAA

Protein sequence :
MISSEQARFSADQGHLERFLNALWLEEGLAENTLAAYRRDLERFSRWLHSQGRTLIGAQREDLLAYLAHRLEGGDKSRSV
ARSVSSLRRFYRYLMGEKIRDNDPSDRVESPRLGRLLPESLSEEEVEALLAAPKTEDSLGLRDRTMLETLYATGLRVSEL
VNLTLPQLNPRQGVVYLSGKGNKERLVPLGEVALSWLDRYCREARLGLVRSQVNEILFLTRRGGAMSRQAFWYLIKRYAR
QSGIQKALSPHTLRHAFATHLLNHGADLRVVQILLGHADLSTTQIYTHVARARLQQLHQQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-47 64
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-47 64