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Name : fliP (Noc_2162) Accession : YP_344152.1 Strain : Nitrosococcus oceani ATCC 19707 Genome accession: NC_007484 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 2496873 - 2497661 bp Length : 789 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGAGCAAGTTGATGCGTCGGGCAAAATTATCTCGATACCAGGGAGTATGGTGTTTAATGTTGCCTGGGTTGCTCCTCCT GCCCATGGCCGCAGGCTGGGCCGCACCGGGTGTTCCTGCGCTGGCAGTAACGGCTGATGGTAATGGCGAGCAAACCTATA CCGTAACTTTGCAAATCCTGGGGCTTATGACGGTTTTAACCTTGCTGCCGGCAGCGGTGATGGTTATGACCTCCTTCACG CGAATTATTGTCGTGTTTTCTATCCTACGCCAAGCGCTGGGATTGGCCCAGACTCCCTCTAGCCAAATTTTGATTGGTCT AGCCCTCTTTTTGACCTTTTTTATTATGAGCCCGGTGTTGGATAAAGCCTATCAGGAAGGGGTAAAACCTTATTTTCAAG AAGAAATCTCCGTGACGGATGCCCTGGCTCGGGTGCGAGAGCCTTTTCACCACTTTATGATAGCCCAGACCCGGGAAACT GACCTTAAACTTTTTGCTGAGATCTCTGGACGGGAAGCGTTCGAGTCTCCTGAGCAGGTACCCTTTTCTTTATTGGTGCC CGCCTTTATTACCAGCGAGCTTAAAACAGCTTTTCAAATTGGTTTCTTATTATTTATTCCCTTTCTCATTATTGATCTTG TGGTGGCAAGTGTATTAATGGCGATGGGTATGATGATGCTTTCCCCCATGCTGGTATCGCTCCCCTTTAAGCTCCTTCTT TTTGTTCTCATCGACGGTTGGTCCCTGCTTATGGGTACCTTAGCCTCAAGCTTTTATGTAGCCTCATGA Protein sequence : MSKLMRRAKLSRYQGVWCLMLPGLLLLPMAAGWAAPGVPALAVTADGNGEQTYTVTLQILGLMTVLTLLPAAVMVMTSFT RIIVVFSILRQALGLAQTPSSQILIGLALFLTFFIMSPVLDKAYQEGVKPYFQEEISVTDALARVREPFHHFMIAQTRET DLKLFAEISGREAFESPEQVPFSLLVPAFITSELKTAFQIGFLLFIPFLIIDLVVASVLMAMGMMMLSPMLVSLPFKLLL FVLIDGWSLLMGTLASSFYVAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 3e-13 | 43 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 1e-16 | 42 |
| hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-16 | 42 |
| hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-16 | 42 |
| XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 4e-17 | 42 |
| hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 4e-17 | 42 |
| hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 1e-16 | 42 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 1e-11 | 42 |
| hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 8e-16 | 41 |
| hrcR | YP_198720.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 7e-16 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_344152.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 2e-47 | 63 |
| fliP | YP_344152.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 9e-45 | 62 |
| fliP | YP_344152.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 9e-42 | 59 |
| fliP | YP_344152.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 6e-41 | 57 |
| fliP | YP_344152.1 | flagellar biosynthesis protein FliP | VFG0188 | Protein | 5e-13 | 42 |
