Gene Information

Name : Noc_2025 (Noc_2025)
Accession : YP_344016.1
Strain : Nitrosococcus oceani ATCC 19707
Genome accession: NC_007484
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 2336931 - 2338028 bp
Length : 1098 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTCGGGCTCTGAAGCTAGCCCAGCGCGGTTTATTTACTACTGACCCTAATCCCCGGGTAGGCTGCGTCCTGGTGCG
TGGCGGCGAAATAGTAGGGGAGGGCTGGCATCAACAGGCCGGCGACTCCCATGCGGAAATCAACGCCTTGCGCCAAGCGG
GTATTCGGGCCCAAGGGTCTACTTGTTATGTGACCTTAGAGCCTTGCTGTCACCGAGGGCGAACTCCACCCTGCACTGAG
GCTTTAATTGAGGCGGGCGTGGTGAGAGTTGTCGCGGCGATGGGAGACCCTCATCCAAAAGTCGCCAGCCAAGGATTGGC
GCAACTTAGAGAGGCTGGTCTCCAAGTGGAGCATGGGTTATTGCAGGAAGAGGCTCAGGCCCTTAACGTGGGTTTTGTCC
AACGCTTGGTCCAAGGTCGTCCCTGGGTACGTTGTAAGCTAGCCATGAGTTTGGATGGGGCCACGGCGCTAGCTTCTGGA
GAGAGTCGTTGGATTACCGCTTCCCCTGCCCGTCGGGATGTGCAGCGGTGGCGGGCCCGCAGTTCCGCGATCTTAACGGG
GATTGGTACTGTCGTGCGAGATGATCCCTCCCTCAACGTCCGTTATGAAGAATTGCAAGACGAGGTGCCGCCAGGGTTTA
GCCGCCAACCATTGCGCGTTGTCCTGGACCGCCGATTAGCCATTATGGCGCAGGCCCGGTTGCTTTCGTTGCGGGGACCG
GTAATGATTGTATGCGCTGATGCAACCTCACCTAAAGCGGAATCTTTACGTGGCAGGGGTGTGGAAGTGATCAGCCTGCC
GGTGACTCCCCAAGGGTTGGACTTAATGGCCTTAATGGCGGTTCTGGCTGCGCGGGAAATTAATGAGCTTCATGTGGAAT
GCGGTGCGCGGTTGGCAGGTTCGCTGCTCCAGGCCGGTTTAATGGACGAGCTTGTACTGTATATTGCTCCTAAATTGATG
GGAGAGGCCGCCTTAGGGTTATTGCAACTGCCTGGCATTCAAACCATGAGGGATTGCATTGAGGTAGACATCAAGGAAAT
GCGGGCGGTGGGTCAGGATTGGCGATTAGTGGCTAAGATAGCGTCGCCTAGCAGATAG

Protein sequence : 
MARALKLAQRGLFTTDPNPRVGCVLVRGGEIVGEGWHQQAGDSHAEINALRQAGIRAQGSTCYVTLEPCCHRGRTPPCTE
ALIEAGVVRVVAAMGDPHPKVASQGLAQLREAGLQVEHGLLQEEAQALNVGFVQRLVQGRPWVRCKLAMSLDGATALASG
ESRWITASPARRDVQRWRARSSAILTGIGTVVRDDPSLNVRYEELQDEVPPGFSRQPLRVVLDRRLAIMAQARLLSLRGP
VMIVCADATSPKAESLRGRGVEVISLPVTPQGLDLMALMAVLAAREINELHVECGARLAGSLLQAGLMDELVLYIAPKLM
GEAALGLLQLPGIQTMRDCIEVDIKEMRAVGQDWRLVAKIASPSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-57 45
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-57 45