|
Name : Noc_1303 (Noc_1303) Accession : YP_343332.1 Strain : Nitrosococcus oceani ATCC 19707 Genome accession: NC_007484 Putative virulence/resistance : Unknown Product : RNA binding S1 Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : 2.7.7.8 Position : 1446114 - 1448411 bp Length : 2298 bp Strand : + Note : - DNA sequence : ATGAAATCGGCAGAGATAATTGCTCAGGAGCTCGAAATCCAGCGTGAGCAGGCAAGTGCGGCTATATGCCTATTAGATGA AGGCGCCACGGTGCCTTTTGTGGCCCGTTATCGAAAAGAAGCTACGGGTGGGATGGATGATACTCAGCTGCGTTATTTAG AAAGCCGTTTAGTTTATTTACGCGAGCTTGAAGAACGCAGGGAGACGATTGCATGTTCCATCGAAAAACAAGATAAGCTA ACTGCGGAATTAGAACAGCAGCTTCTAGCGGCAATGACCAAGACCGAGTTGGAAGATTTATATCTGCCCTATAAGCCAAA GCGGCGCACTAAAGCGCAAATGGCTCGTGAGGCAGGTCTTGAACCGCTCGCATTACAGCTGTTGGAAAATCCGGAACTCG ATCCAGAAACAATAGCGGCGGATTATTTAAATCCGGATAAGGGTATTGAAGAGGTATCAGCAGCCTTAGAAGGTGCGCGG CGGATTTTAATGGAGCATTTTGCTGAGGAGGCTGGTTTGTTGGGCCAGCTCAGGGAATACCTATGGAAACAGGGTGAGCT GAGGGCTAAAGTTCAGGATGGGAAAGGGGAACAAGGCTGTAAGTTCGCGGATTATTTTGATTACCAAGAAGCCATTTGCA AAATTCCCTCCCATCGGGCCTTGGCGCTTTTTCGTGGTCAGAATGAAGGAGTGCTTAAATTAACCCTAGATACGCCCGCT AGGGAGGGGAGAGAAGAACATCCCTGTGAATTCATGATGGCTAAACATTTCGGGGTTAGAGAGCAAGGACGGCCTGCTGA TGCTTGGTTGCTGCAAGCTGTACGGTGGGCTTGGAAAATAAAGCTTTACCCCCGCCTAGAGGCGGATCTCAAACTACGCC TGCGTGAGCAGGCAGAGGAAACAGCTATCGACGTCTTTTCCCGGAATTTGCGTAGTCTGCTATTAGCTGCTCCGGCAGGT CCCCGTCCAATTTTAGGACTCGATCCTGGTTTCCGTACGGGTGTGAAAGTTGCCGTCATCGATGAGACAGGGAAGCTACT AGAAACCGCCACGATCTATCCCCATCCACCCCAAAAACAGTGGGATGCTGCGATTGATATTCTCTCTAGTTTGTTAAAGA AGCATAGGGTTGAATTGGTTGGTATTGGCAACGGTACGGCATCCCGGGAAACTGAGCAGTTGGTGGTGGAACTTTTAAAG AAATTCCCGCAGTTCGAGCTACAAAAGCTACTGATAAGCGAAGCGGGTGCCTCTGTATACTCTGCTTCTGCTGGTGCAGC CCAAGAATTTCCGGATCTTGATGTCTCCTTACGAGGCGCTGTTTCCATTGCTCGCCGTTTGCAAGATCCTCTAGCGGAAC TAGTTAAAATCGATCCCAAATCTATCGGTGTTGGCCAGTATCAGCATGATGTCAATCAGTCCCAGCTAGGTCGGGCGCTG GTGGGCGCCGTGGAAGATTGTGTTAATGCAGTGGGGGTTGATATCAATACGGCTTCTCCAGCCCTGCTGTCCTATGTATC CGGCTTTACTTCCACGGTAGCCCGCAACACTGTGGAGTACCGCGATACTCATGGCCCCTTTGCCTCCCGCGAGGGCCTCA AGCAGATTCCCCGTTTTGGAGTGAAGACGTTTGAGCAAGCAGCCGGCTTCCTGCGCATCAGAGGAGGGGATAATCCGCTT GATGCCTCAGCAGTCCACCCAGAAACTTATCCTGTCGTGCAAAAAATCATGGCTGCGACCGGGCGTGATATACACCGTTT GATTGGTCATAGTGATTTTCTGAATTCCCTTGACCCGGCCTTATTCATCGATGAGCAATTTGGTCTGCCTACGTTTCAAG ATATCCTCAGGGAACTCGAGAAACCAGGGCGGGATCCTCGGCCTGCCTTTAAAACCGCAGCATTTAAGGAAGAGATCCAA ACTTTGGAGGATCTTAAGCCAGGAATGATCCTAGAAGGTGTGGCCACCAATGTCACTGCCTTTGGTGCTTTCGTGGATGT AGGGGTGCATCAAGATGGGTTAGTGCATATTTCCGCCTTGGCAGACCGGTTTGTAAAAGATCCTCATGAGATCGTTTCAG CAGGGGATATTGTGAAAGTAAAAGTCCTGGAGGTTGATAACGTTCGTCAGCGAATTGGCTTAACCATGCGATTAGGCGAG ATGGAAGAAAAACAGTCATCCCAGCTTGCAGCTAAAGGGCACATGAAAAAAACTCGGCGTAGTAAAGCTAAGTTGCCGCC AACTGTTCAAGGAGGGGCAATGGCAGAAGCCTTTTCGCGGGCAAAAAAAAGCACTTAG Protein sequence : MKSAEIIAQELEIQREQASAAICLLDEGATVPFVARYRKEATGGMDDTQLRYLESRLVYLRELEERRETIACSIEKQDKL TAELEQQLLAAMTKTELEDLYLPYKPKRRTKAQMAREAGLEPLALQLLENPELDPETIAADYLNPDKGIEEVSAALEGAR RILMEHFAEEAGLLGQLREYLWKQGELRAKVQDGKGEQGCKFADYFDYQEAICKIPSHRALALFRGQNEGVLKLTLDTPA REGREEHPCEFMMAKHFGVREQGRPADAWLLQAVRWAWKIKLYPRLEADLKLRLREQAEETAIDVFSRNLRSLLLAAPAG PRPILGLDPGFRTGVKVAVIDETGKLLETATIYPHPPQKQWDAAIDILSSLLKKHRVELVGIGNGTASRETEQLVVELLK KFPQFELQKLLISEAGASVYSASAGAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQSQLGRAL VGAVEDCVNAVGVDINTASPALLSYVSGFTSTVARNTVEYRDTHGPFASREGLKQIPRFGVKTFEQAAGFLRIRGGDNPL DASAVHPETYPVVQKIMAATGRDIHRLIGHSDFLNSLDPALFIDEQFGLPTFQDILRELEKPGRDPRPAFKTAAFKEEIQ TLEDLKPGMILEGVATNVTAFGAFVDVGVHQDGLVHISALADRFVKDPHEIVSAGDIVKVKVLEVDNVRQRIGLTMRLGE MEEKQSSQLAAKGHMKKTRRSKAKLPPTVQGGAMAEAFSRAKKST |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 56 |
