Gene Information

Name : Noc_1273 (Noc_1273)
Accession : YP_343304.1
Strain : Nitrosococcus oceani ATCC 19707
Genome accession: NC_007484
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.25
Position : 1410358 - 1411047 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence :
ATGACGCCGGTACTAGAACTCCTCAGCCTTAGTAAGTCTTACTGGGAAAGTGAAACCGAGCACCGGGTGCTCCATAATCT
CACCGCCACGATCCAAAAGGGTGAATGTATAGTACTGCTCGGGCGTAGTGGCTCAGGCAAATCCACCCTCCTTAACCTCA
TTGCGGGTATCGATTTCCCGAGTGCCGGCGAGGTGAACATCAATGGGATATCCTTGACTCAGCTCTCCGAGGAAGATCGC
ACCCTGCTGCGCCGGCGTTATATTGGCTTTATTTTTCAGTTCTTCAATCTTATTCCCACGCTTACCGTAGAGGAAAATTT
GTTGCTGCCCCTAGAACTTAACGGCCGCAATAATCCCACTGAACACGCTCACGCTCAGAGTTTGCTCCAGGAAGTTGGCC
TACTGGAACGTGCCCATAGCTTTCCTGATGAACTCTCTGGGGGCGAGCAACAGCGCGTTGCCATTGCCCGCGCCCTGGTC
CACGATCCCTTGCTGGTGCTGGCCGATGAACCAACAGGAAACCTGGATCTGGAAACCGGCCGCCGGGTTCTGGCTCTCCT
AGACCGCCTGACCAAACAACAGGGTAAAACCCTCATCATGGTCACTCATAGCCCAGAAGTAGTTGGACAAGCAGACCGCA
TCCTGCGGCTACGTCCCGAGGGGTTGGTCGCCGAGGAACTCCCCCAATGA

Protein sequence :
MTPVLELLSLSKSYWESETEHRVLHNLTATIQKGECIVLLGRSGSGKSTLLNLIAGIDFPSAGEVNINGISLTQLSEEDR
TLLRRRYIGFIFQFFNLIPTLTVEENLLLPLELNGRNNPTEHAHAQSLLQEVGLLERAHSFPDELSGGEQQRVAIARALV
HDPLLVLADEPTGNLDLETGRRVLALLDRLTKQQGKTLIMVTHSPEVVGQADRILRLRPEGLVAEELPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-32 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-20 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Noc_1273 YP_343304.1 ABC transporter ATPase CP001581.1.gene798.p Protein 3e-33 43
Noc_1273 YP_343304.1 ABC transporter ATPase NC_008702.1.4606598. Protein 6e-28 43
Noc_1273 YP_343304.1 ABC transporter ATPase CP001581.1.gene598.p Protein 8e-32 43
Noc_1273 YP_343304.1 ABC transporter ATPase NC_012469.1.7686878. Protein 2e-34 42
Noc_1273 YP_343304.1 ABC transporter ATPase NC_012469.1.7686946. Protein 5e-19 42
Noc_1273 YP_343304.1 ABC transporter ATPase NC_012469.1.7685735. Protein 5e-35 42