Gene Information

Name : Noc_1216 (Noc_1216)
Accession : YP_343247.1
Strain : Nitrosococcus oceani ATCC 19707
Genome accession: NC_007484
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 1329485 - 1331623 bp
Length : 2139 bp
Strand : +
Note : -

DNA sequence :
ATGCCATTGTCCATCTTGACGAGTGAAAAACCCTGCTCTCTTGAGAGTCGGGGTAACCCCAACCCCCTAGCTTTAGATAC
TCCAGTCACCGCGCTCAAGGGCGTGGGCCCTAGCCTAGCTAATCGGTTAGCTAGGCTAGGGCTTTGTAAAGTCCAGGATT
TGCTCTTTCATCTCCCTCAGCGTTACCAGGACCGTACCCGGGTAGCCCCCATTGGCACTTTACAAAAAGGCAGGGAGGCA
TTGATCGAGGGGGAAATTCAGTTGTGTGAACTTCGTCCAGGACGCCGCCGGTCCTTGCTCTGTTCTTTAAGTGATGGAAC
AGGACAGATCTTTCTGCGTTTTTTCCATTTCTCGGCCTGGCAGCAAAACTCATTAACCCCGGGAGCGCGGGTATGCTGCT
TTGGTGAACTACGCCAGGGCGCCGCGGGTCTAGAGATGGTTCATCCCGACTATCGCTGCCTCCCGGAGGATAGGCCAACC
GTCACTGAGACCTATCTGACCCCTGTCTATCCTGCTACAGAAGGGTTACGCCAATCCAGTTTGAGGGATCTTATCCAAGG
AGTGTTTAAAGATCTGGGCGAGGAGGGAATCATTGATTATTTACCGTCAGGGCTTCTAGAAGGGGTTGGTTTGCCGACGC
TGAACGAGGCGCTTATTTATCTCCATCAGCCGCCGCCCGATGCTCCCTTAAATTTGCTTGCCGAGGGGAAACACCCTGCA
CAACAGCGGCTGGCTTTTGAAGAATTGCTGGCGCACCATTTGAGTCTACGGCAATTGCATTTACGGGCCTCCCGCCTCCA
GGCGCCCCTTCTCTCCAGCGAAGGGCAGTTGCAACAACGCTTTTTGGCTACACTTCCCTTTCCGTTGACGGCGGCCCAGA
GCCAGGTCGTCCAGGAAATCCTGGCGGATATGGCCCAGGAATCGCCCATGCAGCGCCTACTTCAGGGCGATGTGGGTTCC
GGTAAAACGGTAGTAGCCGCCCTGGCTATTTTGCAGGCGGTTGAGGCTGGATACCAAGCGGTGCTGATGGCCCCCACCGA
ATTACTGGCGGAGCAGCATCTACGCGTCTTACAAGGCTGGTTTTGTCCTTTTGAGATTAGGGTGGAATGGCTGACTGCGA
AAAGGACTACAAAAGCCCGGCGGGAAAGTTTGGAACGGCTCGAAGGGGGAGAAACACCCGTTGCGGTGGGTACCCACGCG
CTATTCCAGGAGGGTGTCAACTTTCATAAGTTAGGCTTAGTGGTGGTTGATGAACAACACCGTTTTGGCGTTGAGCAGCG
TTTGGCGCTGCGGGAGAAGGGGCGCTATGGTAATTGCTGCCCTCATCAATTGATTATGACTGCCACGCCTATCCCCCGTA
CCTTGGCCATGACGGCCTATGCTGATCTGGACACTTCGGTGATTGACCAATTACCCCCTGGACGTATTCCCGTTGCTACC
GCGGTAGCCTCAGATCGCCGCCGCGACGAGGTGGTGGCCAGGGTGCGCCGGGCCTGCAGGGAAGGGAGACAAGCTTATTG
GGTTTGTACCCTGATTGAGGAATCCGATAGTTTACAGGCGCAGGCTGCGGAGGAATCGGCGGCGGAGCTTGCTGAGGCAC
TGCCTGAATTATGCATTGGACTTATTCATGGCAGGATGAAGACGCAGGAGAAAGAGCGCGCCATGGCTGCCTTTAAATCA
GGCGATTTTCATCTTTTGGTAGCGACTACGGTAATTGAGGTGGGGGTGGATGTCCCGAACGCCAGTTTGATGATCATCGA
GAATGCCGAGCGCCTGGGGCTTTCTCAACTGCACCAGCTGCGGGGGCGGGTTGGCCGCGGTGCGGCGGATAGCTATTGTG
TACTGTTGTATCATGGGCCGTTATCCGAGCTGAGCCGGGCGCGGTTAGCTTGCTTGCGGGCCACTAACGATGGCTTTGAG
ATTGCACGCCGCGATCTTGAGCTTCGCGGTCCTGGCGAGGTACTAGGAACCCGCCAAACGGGTTTGCCCCAATATCGGGT
GGCTAATCTTATGCGGGACCAGGAGCTATTGGTAAGTGTGGGGCAGGTAGCAGACCGATTTCAGCAGCGCTATCCTGCGC
AAGTAGCTTCCTTAATCCGCCGTTGGCTGGGGGAAGAAAGCCGGTATGGGGAAGTGTAG

Protein sequence :
MPLSILTSEKPCSLESRGNPNPLALDTPVTALKGVGPSLANRLARLGLCKVQDLLFHLPQRYQDRTRVAPIGTLQKGREA
LIEGEIQLCELRPGRRRSLLCSLSDGTGQIFLRFFHFSAWQQNSLTPGARVCCFGELRQGAAGLEMVHPDYRCLPEDRPT
VTETYLTPVYPATEGLRQSSLRDLIQGVFKDLGEEGIIDYLPSGLLEGVGLPTLNEALIYLHQPPPDAPLNLLAEGKHPA
QQRLAFEELLAHHLSLRQLHLRASRLQAPLLSSEGQLQQRFLATLPFPLTAAQSQVVQEILADMAQESPMQRLLQGDVGS
GKTVVAALAILQAVEAGYQAVLMAPTELLAEQHLRVLQGWFCPFEIRVEWLTAKRTTKARRESLERLEGGETPVAVGTHA
LFQEGVNFHKLGLVVVDEQHRFGVEQRLALREKGRYGNCCPHQLIMTATPIPRTLAMTAYADLDTSVIDQLPPGRIPVAT
AVASDRRRDEVVARVRRACREGRQAYWVCTLIEESDSLQAQAAEESAAELAEALPELCIGLIHGRMKTQEKERAMAAFKS
GDFHLLVATTVIEVGVDVPNASLMIIENAERLGLSQLHQLRGRVGRGAADSYCVLLYHGPLSELSRARLACLRATNDGFE
IARRDLELRGPGEVLGTRQTGLPQYRVANLMRDQELLVSVGQVADRFQQRYPAQVASLIRRWLGEESRYGEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 3e-93 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Noc_1216 YP_343247.1 ATP-dependent DNA helicase RecG BAC0356 Protein 3e-170 60