Gene Information

Name : PSHAa0622 (PSHAa0622)
Accession : YP_339150.1
Strain :
Genome accession: NC_007481
Putative virulence/resistance : Virulence
Product : response regulator in two-component regulatory system
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 643378 - 644727 bp
Length : 1350 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type r : regulator

DNA sequence : 
ATGCCAGCAATAAAACCGCAAGGTGCAAAAGTATTATTAGTGGATGACGATGCCAGCTTATTAAAATTGCTCGCTATTCG
TATCGAATCAAAAGGCTACGAGGTTACCACCTGCGAGAGCGGCCTAATTGCGTTACAAATATTAAAAAGCCAAGTGTTCG
ATGCCGTAGTAACCGACCTGCGCATGGACGAAATGGATGGCATGGCACTGCACCGCCAATTGCAAAGCCGCTATCCGGCA
TTGCCCGTTATTATGATGACAGCGCATGGCTCTATTCCTGATGCGGTAGAGGCTACCAAACAAGGCATTTTTGCATTTAT
TACCAAACCAATAGATAAAGACGAGTTATTCGACAGCTTAGCAAAAGCGATAGAAATACACGGCGTAAATGCCGATGAAA
TAATACCCACTAGCAATATAGTTACTCGTAGCGGCGCTATGCTACATTTGCTAGAGCAAGTTAAACTGCTAGGGCCAACG
CAAGTTAACGTATTAATATCGGGAGCCAGTGGTACGGGTAAAGAGTTATTAGCTCAAGCTATTCATCAGCATAGCCATGT
AAGTAAAGGCCCATTTGTAGCGATAAACTGCGGCGCAGTACCGGGTGAACTGCTAGAGTCAGAATTATTTGGTCATAAAA
AAGGCTCGTTTACTGGGGCAATAAAAGATCACCAAGGACTGTTTCAACAAGCTGAGGGAGGCACCTTATTTTTAGATGAA
ATAGGTGATATGCCGCTTAATTTACAAGTTAAGTTACTGCGCGTATTGCAAGAAAAAACCATACGTCCAGTCGGCTTTCA
AGAAGAAATAGCCATAGATGTTCGCATTGTATCGGCAACTCATAAAAACCTCCCCGAAGCGATTATAAATCAGCAGTTTA
GGGAGGATTTATACTACCGCTTAAACGTGGTTAATTTAAAACTCCCTCCTTTGTGCGAGCGTCGCGAAGATATAAGTCTA
CTTGCACAATACTTTAGCGCCAGTATTGCAAAGCGAATGAAGCAAAGCGAAAAACACTTTGCCAACGACGCCATGCACGC
ACTCGTGCGTTACGACTGGCCAGGTAATATTCGCCAACTTCAAAACGTGGTAGAGCAAGTTGTAGCACTTACCCCAAGCG
AAGTTATTTCAGAGCATTTAGTGCTAAGTGCATTAAATAGCAACGAAAAAAATGTAGAGCCATTGTCGCTAAACGACGCT
AAAAAAGAATTTGAACGCGACTACGTAATAAACACCCTTAAAATGGCTGGTGGAAATGTCGCCGAAGGCGCAAAACTAGC
TAAACGTAACCGTTCAGATTTTTATAAACTGATTAAAAAGCACAATATAGATGTTGATAATTTAGCTTAA

Protein sequence : 
MPAIKPQGAKVLLVDDDASLLKLLAIRIESKGYEVTTCESGLIALQILKSQVFDAVVTDLRMDEMDGMALHRQLQSRYPA
LPVIMMTAHGSIPDAVEATKQGIFAFITKPIDKDELFDSLAKAIEIHGVNADEIIPTSNIVTRSGAMLHLLEQVKLLGPT
QVNVLISGASGTGKELLAQAIHQHSHVSKGPFVAINCGAVPGELLESELFGHKKGSFTGAIKDHQGLFQQAEGGTLFLDE
IGDMPLNLQVKLLRVLQEKTIRPVGFQEEIAIDVRIVSATHKNLPEAIINQQFREDLYYRLNVVNLKLPPLCERREDISL
LAQYFSASIAKRMKQSEKHFANDAMHALVRYDWPGNIRQLQNVVEQVVALTPSEVISEHLVLSALNSNEKNVEPLSLNDA
KKEFERDYVINTLKMAGGNVAEGAKLAKRNRSDFYKLIKKHNIDVDNLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 2e-66 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 2e-66 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSHAa0622 YP_339150.1 response regulator in two-component regulatory system BAC0467 Protein 5e-85 44
PSHAa0622 YP_339150.1 response regulator in two-component regulatory system BAC0089 Protein 5e-82 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSHAa0622 YP_339150.1 response regulator in two-component regulatory system VFG1214 Protein 7e-77 42
PSHAa0622 YP_339150.1 response regulator in two-component regulatory system VFG1249 Protein 1e-69 42