Gene Information

Name : PSHAa0416 (PSHAa0416)
Accession : YP_338957.1
Strain :
Genome accession: NC_007481
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 430606 - 431715 bp
Length : 1110 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
GTGGATTACTGTGGCCCAACCATGAGTATTGTTGATACAAGTACAGGCGAGTGTCGTACTGCACAAGTGTTCGTTGCGGT
CATGGGTGCATCAAATTATACCTATGCCGAAGCGACTTACAGCCAGAAACTCGAAGATTGGGTGATGAGTCACGCCCGTT
GTTTTGAGTTTCTTGGCGGTGTTTCTGAGCTAATAATTCCTGACAACCTTAAAAGTGCCGTCACCAAACCGTGTCGATAT
GAGCCTGACTTAAACCCAACCTACCAACAACTAGCGACACATTACGATACGGTCATTGTGCCCGCTAGACCCTATAAACC
AAAGGATAAGGCTAAGGCTGAAGTGGGTGTGCAAATTATTGAACGTTGGATAATGGCGCGCCTTCGCAATGAAACCTTCT
TTAGCTTGCGTCAATTGAACCTGAAAATACAAGCATTACTGGTCAATTTAAATCAACGTAAAATGAAAAAGCATCCTGGC
TCACGGCTCAGTCAGTTTGATGCTATCGACAGACCTGCACTCAAACCACTGCCCACACAGCCTTACAGCTATACCTTAGT
AAAACAGGTGAGCGTGCATATTGATTATCATGTGGAAATTGAAAAGCACTACTACTCAGTGCCACATACCTTAATTAAAC
AAAAGCTTGAAGCCCATGCCTCCGGGAAGTTGGTGACACTCTACCATCAAGGCATACGAGTCGCTGTTCACCCCAGATCA
TACCGAGAAGGTGCGCACACCACGCTTGATCTGCATATGCCTATCGCTCATCAAAAGCAGCAACAATGGACACCACAGCG
GTTCGAACGCTGGGCGAGTAAATTTGGCACATCAACTGAGCAGTTTGTTATGCAATTGATGCAAGCTAAAAAACATCCAG
AGCAAAGCTACCGTGCTTGTATGGGGTTATTAAGGCTAGGTAAAAAGTTTAGTGATCAACGTCTTGAAGCCGCCTGTCAT
CGCGCATTAACCACAGGTGTTACTCGCGTTAAACAAGTAAAGACTATCTTAGAAAAAGGCTTGGATAAACAACCCTTGCC
ACAAGCTCAAGGTGATTTACTACAAGATATTGATCATAAAAATATCCGTGGCAACCACTATTACCATTAA

Protein sequence :
MDYCGPTMSIVDTSTGECRTAQVFVAVMGASNYTYAEATYSQKLEDWVMSHARCFEFLGGVSELIIPDNLKSAVTKPCRY
EPDLNPTYQQLATHYDTVIVPARPYKPKDKAKAEVGVQIIERWIMARLRNETFFSLRQLNLKIQALLVNLNQRKMKKHPG
SRLSQFDAIDRPALKPLPTQPYSYTLVKQVSVHIDYHVEIEKHYYSVPHTLIKQKLEAHASGKLVTLYHQGIRVAVHPRS
YREGAHTTLDLHMPIAHQKQQQWTPQRFERWASKFGTSTEQFVMQLMQAKKHPEQSYRACMGLLRLGKKFSDQRLEAACH
RALTTGVTRVKQVKTILEKGLDKQPLPQAQGDLLQDIDHKNIRGNHYYH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3528 YP_854247.1 transposase for ISEc12 Not tested PAI I APEC-O1 Protein 3e-111 60
ORF_6 AAZ04417.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 2e-111 60
unnamed CAC39294.1 hypothetical protein Not tested LPA Protein 5e-111 59
VPI2_0005c ACA01822.1 IstA Not tested VPI-2 Protein 4e-88 50