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Name : PSHAa0401 (PSHAa0401) Accession : YP_338942.1 Strain : Genome accession: NC_007481 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 419833 - 421788 bp Length : 1956 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type m : membrane component DNA sequence : ATGGATAGCTTTATCCGCTCAATTATTAATGCCCCACGTGCTAAAAAGCGTGTTATCACGCTTTTTATTGACTCACTTTT TATAGCAGCCGCTTTTTGGTTAGCGTTAATAGTAAGGCTTGACAGCTTAGAGCCATTAAGTGTTTCTGGTAATTGGTTAT TATTAGCACTCTTAATTCCCATTAGTTTATATGCATTTATTACTTTAGGTTTATACCGCGCCGTATTGAGGTATATGAAC TCACAAGCAGTATGGGCCATTATACTCGGTACGCTTATAACTACCGTAAGTTTGGTTTTATTAGCATTTTTTGTTGGTAT AGAGATACCACGTACTATGCCATTTATTTTTGCTTGGCTATGTTTATTAACCGTCGGTGGCTCACGTATAATAGTTCGCG CACTTATAGGAAGAATGACCACCAGCAACAAAGATGCGGTGATTATTTATGGTGCAGGATCGTCGGGGCGGCAATTAGCA ACGGCTTTAAATGCAGGGCCAGAGTATTTTGTAAGTGCGTTTATTGATGACGATGTGACAAAACATGGCTCTATAATACA AGGCATACCGGTACGTGCGTTTAATGATATACATGCATTAATAAAAAAACGTAAAGCAACGAAAGTGTTGCTCGCTATGC CCAGTGAAACACGTGCAAGGCGTAAAGAAGTTCTCGCACAACTTGAGCCATTAACCATTAAAGTACTTTCTATCCCTGGT ATGGCTGACATAGTCGAAGGTAAAGCAAAACTTTCTGAATTTAGAGATGTTGAAATTGAAGATTTACTAGGACGCGACCC AGTAACCCCTAAAGATGATTTAATGACTGTTAATATAACTGATAAAGTAGTCATGGTTACTGGCGCTGGTGGCTCAATAG GCTCTGAGCTGTGTAGACAAATAATTAAACTCAAACCGACTAAATTGGTGTTGTTTGAGCGCAGTGAAATCGCCCTTTAT TCAATTGAAAAAGAATTAGGTGAATACATAATTAGCAATACGCTTAATATTGAACTCATCCCTATCATGGGCTCAGTACA ACGTGTAAATCGCCTTGAAACGGTAATGAGAACTTTCGGTGTGCGAACCATCTACCACGCCGCGGCTTATAAGCACGTAC CATTAGTTGAGCACAATGTAGTAGAAGGTGTACGTAATAATGTATTTGGTACCTATTACGCTGCAAAGGCCGCCGTTGAG GCTAAGGTAGATACCTTTGTACTCATTTCTACCGATAAAGCAGTACGCCCGACTAATATTATGGGCGCAACAAAGCGTAT GGCTGAGTTAGTACTGCAAGGTTTAGCACAAGAGCAAGGCGCTAAACACAAAACGCGTTTTTGTATGGTGCGGTTTGGCA ATGTACTTGGTTCAAGTGGCTCAGTAGTACCATTATTTCGCCGCCAAATAAAAGAAGGTGGGCCAATAACATTAACTCAC CCCGATATTACCCGTTACTTTATGACTATACCTGAAGCAGCACAGCTCGTTATACAAGCAGGCGCTATGGGCAAAGGCGG TGACGTGTTTGTACTCGATATGGGTGACTCGGTAAAAATAAGTGATTTGGCAACCAAAATGGTTAGGTTATCGGGCCTCG AAATTAAAACTGATGATACCCCGCATGGTGATATAGAAATAAAGTGTACTGGCTTACGCCCAGGTGAAAAACTGTATGAA GAGCTATTAATAGGCGATAACGTAGAGCAAACATCGCATGAGCGTATAATGACGGCAAAAGAAGTAATGTTACCTTTGTC AGAGCTTAATGTATTTATTGAAGCGCTTGATATTGCATGCCATGACTTTAATCACGAAACTATACGTCAGTTATTACTTG ATGCTCCTACAGGCTTTAACCCAACCGACGGCATCTGTGATTTAGTATGGAATGCCAGACTTGAAAATAAAGGTAATACT GAAAGCGAAAGTAATGTGGTTAATTTAAGTAAATAG Protein sequence : MDSFIRSIINAPRAKKRVITLFIDSLFIAAAFWLALIVRLDSLEPLSVSGNWLLLALLIPISLYAFITLGLYRAVLRYMN SQAVWAIILGTLITTVSLVLLAFFVGIEIPRTMPFIFAWLCLLTVGGSRIIVRALIGRMTTSNKDAVIIYGAGSSGRQLA TALNAGPEYFVSAFIDDDVTKHGSIIQGIPVRAFNDIHALIKKRKATKVLLAMPSETRARRKEVLAQLEPLTIKVLSIPG MADIVEGKAKLSEFRDVEIEDLLGRDPVTPKDDLMTVNITDKVVMVTGAGGSIGSELCRQIIKLKPTKLVLFERSEIALY SIEKELGEYIISNTLNIELIPIMGSVQRVNRLETVMRTFGVRTIYHAAAYKHVPLVEHNVVEGVRNNVFGTYYAAKAAVE AKVDTFVLISTDKAVRPTNIMGATKRMAELVLQGLAQEQGAKHKTRFCMVRFGNVLGSSGSVVPLFRRQIKEGGPITLTH PDITRYFMTIPEAAQLVIQAGAMGKGGDVFVLDMGDSVKISDLATKMVRLSGLEIKTDDTPHGDIEIKCTGLRPGEKLYE ELLIGDNVEQTSHERIMTAKEVMLPLSELNVFIEALDIACHDFNHETIRQLLLDAPTGFNPTDGICDLVWNARLENKGNT ESESNVVNLSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 7e-80 | 43 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-83 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSHAa0401 | YP_338942.1 | polysaccharide biosynthesis protein | VFG0029 | Protein | 3e-122 | 54 |
| PSHAa0401 | YP_338942.1 | polysaccharide biosynthesis protein | VFG1300 | Protein | 6e-83 | 42 |
