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Name : mshE (PSHAa2692) Accession : YP_341182.1 Strain : Genome accession: NC_007481 Putative virulence/resistance : Virulence Product : mannose-sensitive agglutinin biogenesis protein MshE Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2848887 - 2850614 bp Length : 1728 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 8550192, 11985966 DNA sequence : ATGAGACCTAGTTTAAAAATGCGTTTAGGGGATTTACTTGTTCATGAGCATATGATCACCGAAGCACAGTTAAGTGAAGC CTTAAATGTTCAAGCGGCTACGGGTCGTAAACTGGGCTCTACCCTAATCACACTTGAATTTATTAGTGAACCACAATTAC TACGCTTTTTAGCGCAGCAGCTTAAAGTTCCTTTTTTAGATATTTCGCAGCGTAGAATATCACCGGATGTATCTAAGCTT TTATCAGAAGTGTATGCACGGCGCTACCGAGCGTTAGTTATTGAAGACAACGGCGACTCAGTTTTAGTTGGGATGAGCGA TCCTGCTGACCTAAGAGGGTTAGATCAACTTGCTCCTATACTCGCCCCAAAGCGAATAGAATTAGCGGTTGTGCAAGAAA GCCAAATAATGGCGGCATTTGACAACGTATACCGTCGTACAGAAGAGATCACTAGTTTTGCAGAGCAATTACACGAAGAA TACCAAGATGTAGAAGAATTCGATCTTAATTCACTCGGTGACGAAACATCCGATGCTACCGTGGTTAAGTTGCTGCAATC TATTTTTGAAGATGCGGTGCAAGTACGTGCCTCAGATATTCATATTGAGCCCGATGAAGGCTTATTACGTATTCGCCAGC GGGTTGATGGCGTACTGCAAGAGCACACCTTAAATCAGGTGAAAATAGCCTCAGCTTTAGTACTGCGTTTAAAGTTAATG TCGGGGTTAGATATTTCAGAAAAGCGCCTGCCACAAGACGGCCGCTTTAATATTAAAGTGCGTAGCCACAGTATAGATGT ACGACTCTCGACCATGCCGATTCAACATGGCGAATCTGTAGTGATGCGCTTGCTCGATCAATCAGCCGGGTTATTATCGT TAGATGAAACTGGTATGCCGGCACATATTTTAAAACGGGTGCGCAGTATTATTAAACGCCCCCATGGCATGGTATTGGTA ACAGGGCCAACTGGCTCGGGTAAAACCACCACTTTGTATGGAGCGTTAAGCGAGCTTAATCAACAAGAAAGTAAAATTAT TACCGTAGAGGATCCGGTTGAATACCGAATTGGGCGTATAAACCAAGTACAGATAAATAATAAAATAGGCTTAAGTTTTG CGAGTATTTTACGTACCGCATTACGACAAGATCCCGACATTATTATGGTCGGCGAAATGCGTGACCAAGAAACCGTTGAT ATAGGCTTAAGAGCTGCATTAACCGGTCACTTAGTGTTATCTACATTACATACTAACGATGCCATTACTAGTGCAATGCG CCTTATAGATATGGGAGCTCCTGCCTATTTAGTCGCAAGCTCGTTGCGTGCCATTATTGCTCAGCGCCTTGTTAGGCGTG TATGCAGCGATTGTAAATCGCCGTATCAACCAGATCATCAAGAAAGCAGTTGGTTAAAGTACCTTGGCGAAAATACAACA GATACACAGTTTTATAAAGGACAAGGCTGTACTGCGTGTAATCATAGTGGTTATAAGGGGCGAGTAGGCATTTTTGAACT ACTGGAAATGGATGATGCAATGATGGATGCCTTGCGTATAAATGACACGCAAGGCTTTGCTAAAGCGGCTAAAAATAGCG CTAACTTTATTCCGCTCTCAGCTATGGCACTTAATTATGCAAAACAAGGTATCACTTCTTTAGATGAAGTATTTAAGGTT GCAGAATACATCCCCGAAATAGTCGGAGGTGATGATGCAGCTATATAG Protein sequence : MRPSLKMRLGDLLVHEHMITEAQLSEALNVQAATGRKLGSTLITLEFISEPQLLRFLAQQLKVPFLDISQRRISPDVSKL LSEVYARRYRALVIEDNGDSVLVGMSDPADLRGLDQLAPILAPKRIELAVVQESQIMAAFDNVYRRTEEITSFAEQLHEE YQDVEEFDLNSLGDETSDATVVKLLQSIFEDAVQVRASDIHIEPDEGLLRIRQRVDGVLQEHTLNQVKIASALVLRLKLM SGLDISEKRLPQDGRFNIKVRSHSIDVRLSTMPIQHGESVVMRLLDQSAGLLSLDETGMPAHILKRVRSIIKRPHGMVLV TGPTGSGKTTTLYGALSELNQQESKIITVEDPVEYRIGRINQVQINNKIGLSFASILRTALRQDPDIIMVGEMRDQETVD IGLRAALTGHLVLSTLHTNDAITSAMRLIDMGAPAYLVASSLRAIIAQRLVRRVCSDCKSPYQPDHQESSWLKYLGENTT DTQFYKGQGCTACNHSGYKGRVGIFELLEMDDAMMDALRINDTQGFAKAAKNSANFIPLSAMALNYAKQGITSLDEVFKV AEYIPEIVGGDDAAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-83 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-83 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mshE | YP_341182.1 | mannose-sensitive agglutinin biogenesis protein MshE | VFG1876 | Protein | 8e-89 | 46 |
| mshE | YP_341182.1 | mannose-sensitive agglutinin biogenesis protein MshE | VFG0182 | Protein | 4e-85 | 42 |
| mshE | YP_341182.1 | mannose-sensitive agglutinin biogenesis protein MshE | VFG2048 | Protein | 2e-83 | 41 |
