|
Name : dnaB (PSHAa2435) Accession : YP_340926.1 Strain : Genome accession: NC_007481 Putative virulence/resistance : Unknown Product : replicative DNA helicase; chromosome replication; chain elongation Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 2585161 - 2586456 bp Length : 1296 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 6323420; Product type e : enzyme DNA sequence : ATGCTTGATAACCAAGCATTTGACCGCGTAGCAGAGCTTGTTGTATCACAGGATTTTTATACCCGCACGCATAAGCTTAT TTTTGAAGCGATGACAACGCTTGCTGAAATTGGCGATCCGATCGATTTAATTACTATTTCAGAGAGCCTAGAAAAAAATA ATAAATTAGCAGGAATTGGTGGTTTTGCTTATTTAGCTGAAATAGCCAAAAACACCCCAAGTGCTGCTAATATTGACGCT TACGCAAGTATTGTGCGCGAACGTGCTGTGGTACGTGAAATGATTGGTGTAGCAAATGAAATTGCCGAAGCAGGTTTTAA TACCGAAGGGCGCACCAGCCACGATTTGCTCGACTTTGCTGAGAGTAAAGTATTTAAAATTGCTGAGCAACGCACAAAAA ATAATGAAGGCCCGCAAAGCATTCATAGCATACTTGAAAAAACAGTTGATAAAATAGAAGAGCTTTATCAATCACCGCAA GACGGTGTAACAGGTGTGAGTACCGGCTATGCCGACCTTGATAAAATGACCACAGGTTTGCAACCATCTGACTTAATTAT AGTTGCGGCACGTCCATCTATGGGTAAAACCACTTTTGCGATGAACCTTGCAGAACATGCTGCAATGACCCAAGACAAGC CGGTATTAATTTACTCACTAGAGATGCCCTCAGAACAAATTATGATGAGGATGTTGGCGTCTCTTGGGCGTATTAACCAA ACTAAAGTGCGTACTGGTCAGTTAGATGATGACGATTGGGCACGACTTTCATCAACCATGGGTTTGTTGATGGAAAAAGG CAAAATGTACGTTGATGATGCTTCGGGCTTAACACCTACTGATGTACGCTCTCGTGCACGACGTATTGCCCGCGATCATG GTGGTATTAGTATGATCATGGTCGATTACTTGCAATTAATGCGAGTACCTAGCCTTGCTGATAACCGAACGCTTGAAATT GCCGAAATTTCACGTTCACTTAAAGCATTAGCAAAAGAGCTAAAATGTCCGGTTGTTGCGCTTTCGCAGCTTAACCGTAC GCTTGAGCAACGTGCCGATAAACGTCCAATTAACTCAGATTTACGTGAGTCGGGCTCTATTGAGCAAGATGCCGATTTAA TCATGTTTATTTATCGTGATGAAGTGTACAACGAAGACAGTACCGATAAAGGTATTGCCGAAATAATCATAGGTAAGCAA CGTAACGGTCCTATTGGTAAAGTACGTTTAACCTTCCAAGGTCAATTTTCTCGCTTTGATAATTATGCGGGGCCAGCAGT AGATGACGATTATTAA Protein sequence : MLDNQAFDRVAELVVSQDFYTRTHKLIFEAMTTLAEIGDPIDLITISESLEKNNKLAGIGGFAYLAEIAKNTPSAANIDA YASIVRERAVVREMIGVANEIAEAGFNTEGRTSHDLLDFAESKVFKIAEQRTKNNEGPQSIHSILEKTVDKIEELYQSPQ DGVTGVSTGYADLDKMTTGLQPSDLIIVAARPSMGKTTFAMNLAEHAAMTQDKPVLIYSLEMPSEQIMMRMLASLGRINQ TKVRTGQLDDDDWARLSSTMGLLMEKGKMYVDDASGLTPTDVRSRARRIARDHGGISMIMVDYLQLMRVPSLADNRTLEI AEISRSLKALAKELKCPVVALSQLNRTLEQRADKRPINSDLRESGSIEQDADLIMFIYRDEVYNEDSTDKGIAEIIIGKQ RNGPIGKVRLTFQGQFSRFDNYAGPAVDDDY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 3e-100 | 51 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 3e-97 | 50 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-99 | 50 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 6e-99 | 49 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-89 | 49 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-89 | 49 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-87 | 48 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 5e-97 | 48 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 8e-84 | 46 |
