Gene Information

Name : rdgC (PSHAa2381)
Accession : YP_340872.1
Strain :
Genome accession: NC_007481
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 2529447 - 2530358 bp
Length : 912 bp
Strand : +
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGTGGTTTAGTAACCTTATATGTTATCGCTTTAAACAAGATGTTTCGTATACACAAGAAGATTTTGACAAAGCATTAGA
GCAAGACTTATTTCGTCCATGTACGGGCCAAGAGCTGGCTACATTTGGCTGGACAAAAGCGTTTGGGAAACACGGCGAAA
CTTTATCGCATTTTTCACAAAAAAGTATTTTAGTTTGCGCTAAGCGCGAAGAAAAAGTATTACCTGCATCGGTTATAAAT
GAGCTAGTTGCAGAAAAAGTCGATTTAATTGAAGCTGAAGAAAATCGCCCAGTTAAAAAGAAAGAAAAAGACGAATTAAA
AGAAAACATTTTACATACACTGCTACCACAAGCATTTAAAAAGTCGAGCTTACAGTTTGCATTTATTGACCAAGAAAACG
GCTGGGTTGTAGTTAATAGCGGCAGTTTTAACAAAGCCGAAGAGTTACTCGCACTTTTACGTAAATCATTAGGCACACTG
CCTGTAGTACCTGCATTTGCCAATTACGACCTAGATGTATTTTTAACCGACTGGTTAACTAACTTCAGCACGCCTGAAGG
CTTTGCAATTGGCTCAGATGCAGAGTTAGAAGAAGCAGACGATAGTGGCGCGCAAGTTAAGCTTAAAGGCCACGACCTAT
CGTGCGACGAAGTTAAATCGCATCTTGAAACAGGCAAACGTGTTACTAAGCTTGCACTTGATTGGCAAGAACGCGTTAAG
TTTATGCTGCAAAACGACGGCTCTATTAAGCGTTTAAGCTACAGCGATACCTTAAAAGAAGAAAATGCTGATATTCCAAA
AGAAGACATGGCAGTAAAACTCGATGCTGACTTTATTTTAGCTTCAGAAGAAATTAAACAGCTACTTGAAGAGCTAACTC
AAGGCTTAGGCGATATAGACGACTTAGCTTAA

Protein sequence :
MWFSNLICYRFKQDVSYTQEDFDKALEQDLFRPCTGQELATFGWTKAFGKHGETLSHFSQKSILVCAKREEKVLPASVIN
ELVAEKVDLIEAEENRPVKKKEKDELKENILHTLLPQAFKKSSLQFAFIDQENGWVVVNSGSFNKAEELLALLRKSLGTL
PVVPAFANYDLDVFLTDWLTNFSTPEGFAIGSDAELEEADDSGAQVKLKGHDLSCDEVKSHLETGKRVTKLALDWQERVK
FMLQNDGSIKRLSYSDTLKEENADIPKEDMAVKLDADFILASEEIKQLLEELTQGLGDIDDLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 1e-58 41