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Name : topB (PSHAa2356) Accession : YP_340847.1 Strain : Genome accession: NC_007481 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 2499858 - 2501747 bp Length : 1890 bp Strand : - Note : decatenates replicating daughter chromosomes DNA sequence : GTGTTACCTAAACCACATAAAAAAAGTGATGGTTTTATCACTGCTGGTAATGGCGATGTTGTTACTTGGTGTATAGGTCA TTTATTAGAGCAAGCTGAGCCTGAAGCATACAACCCCGATTATAAAAAATGGGCTGTTGAGCATTTACCGATTGTTCCTA ATGAATGGAAGCTTGTCGTTAAAAGTAAAACAAGAAAGCAATTTACAGTAGTAAAAACATTAATAAAAAAAGCCGATACG CTAGTTAATATGGGCGATCCAGATCGAGTCGGGCAAATCCTGATTGACGAAGTAATTAATCATTGTGGTGTGTCTAAAGC AAAAAAAACACAGGTTTTAAGGTGCTTAATTAGCGACTTAAACCCAGCAGCAGTAAAAAAAGCATTAAACAACTTACGTA AAAATACAGATTTCATTCCGCTTGCTACATCAGCATTAGCACGAGCAAGAGCTGATTGGCTTTATGGCATTAACATGACT CGCCTATGTACGCTACAAGGCCGTCAATCTGGCTATAATGGCGTTTTATCAATTGGTAGGGTACAAACACCTGTTTTAGG TTTAATTGTCCACAGAGACCTAGAGATTGCGAATTTTGTATCAAAACCATTCTATGAGGTTATCTGTACGCTTCTTACTT CAAAAGGTGAGGCGTATCAGGCTAAATGGCGTCCAAGTAAAGCATGTGAACCTTACATGGATGAAGACAATCGGGTGTTG TCTAAACCGTTAGCATTAAATGTTATTTCAAAAGTACAAAACAAAGCAGGAAAAGTAGTTAATGTAACTCAAGCAAAAAA AGCGACACCTCCACCATTACCTTATAGTTTATCGGCCTTACAAATTGATGCGGCCAAAAGGTTTGGTATGAGCGCACAAT CAGTACTTGATACGTGTCAGCAATTATACGAACGACATAAATTAATTACTTACCCTCGCTCAGATTGCCGGTATTTACCT AAAGAACATTTGAATGATGTAAAGCAAGTCGTAGGCGCTATTGGTAAATCCTGCTCAGCTTTAAGTGATGCCGCAAACAA CGCGAATCTTAGTCTAAAAAATAAAGCGTGGAATGACTCAAAGGTAAGTGCCCATCACGCGATAATTCCTACATCAAAAT CAACTGATTTGAGCCGCTTATCACCTGCTGAAAATAATATTTATGAGCTTGTTGCTCGCCAATACCTTATTCAGTTCTAC CCTCCGTTTGAGTATGTAGATAAGCAAATAGATACGGAAGTGTCAGGCGGTTTATTTATTTCCAAACAAAAAGACGTGGT ATCACAAGGTTGGAAAGCTTTATTCCCTTCAAAACAAAAATCACAAGCGGAAAGTGAATTCTCAGCGGTCAGCCTTCCAA ATGTTTCAAAAGGAGATGAAGTACATTGTCAGCAAGCTGACTTAATAGAAAAGCAAACTACACCACCTAAGTACTTCACT GATGCTACATTACTTTCAGCCATGACAGGTATAGCTCGTTATGTAACTGACGCTTCAATTAAAAAAGTATTACGTGATAC TGATGGATTGGGAACTGAGGCTACAAGGGCTGGGATAATTGAGCTGTTATTTAAGCGTCAATTTTTGACTCGTAAAGGTA AGGATATAAGAGCAACTGATGTTGGTACGCAATTAATATGTTCTTTGCCAGAGAGAATGACAATACCTGATATGACAGCT CACTGGGAATCCCAATTAGAAGCTATTAGCCAAAAAGAAATTAAATACGCCCACTTCATGGATCCAATTACGCAAAGTAT AGATACGTTAATCGCTGAGGTTAAGACAGTTACATTTAACGGGTTAAAAGGTAAGGGAACGCCTTATAAATCTAAAAAAT ACTTTAAGACAAAGACTAAAGTAAATAAAAAGAATGTGGAAAGGTTATAG Protein sequence : MLPKPHKKSDGFITAGNGDVVTWCIGHLLEQAEPEAYNPDYKKWAVEHLPIVPNEWKLVVKSKTRKQFTVVKTLIKKADT LVNMGDPDRVGQILIDEVINHCGVSKAKKTQVLRCLISDLNPAAVKKALNNLRKNTDFIPLATSALARARADWLYGINMT RLCTLQGRQSGYNGVLSIGRVQTPVLGLIVHRDLEIANFVSKPFYEVICTLLTSKGEAYQAKWRPSKACEPYMDEDNRVL SKPLALNVISKVQNKAGKVVNVTQAKKATPPPLPYSLSALQIDAAKRFGMSAQSVLDTCQQLYERHKLITYPRSDCRYLP KEHLNDVKQVVGAIGKSCSALSDAANNANLSLKNKAWNDSKVSAHHAIIPTSKSTDLSRLSPAENNIYELVARQYLIQFY PPFEYVDKQIDTEVSGGLFISKQKDVVSQGWKALFPSKQKSQAESEFSAVSLPNVSKGDEVHCQQADLIEKQTTPPKYFT DATLLSAMTGIARYVTDASIKKVLRDTDGLGTEATRAGIIELLFKRQFLTRKGKDIRATDVGTQLICSLPERMTIPDMTA HWESQLEAISQKEIKYAHFMDPITQSIDTLIAEVKTVTFNGLKGKGTPYKSKKYFKTKTKVNKKNVERL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 5e-110 | 41 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 5e-110 | 41 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 4e-110 | 41 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 4e-103 | 41 |
