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Name : gspF (PSHAa0234) Accession : YP_338780.1 Strain : Genome accession: NC_007481 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 249428 - 250663 bp Length : 1236 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; Product type t : transporter DNA sequence : ATGGCAGCATTTGAATACCGTGCCCTAGATGGCCGAGGCAAAGAAAAAAAAGGCATTTTAGAAGCGGATACAGCAAAACA AATTCGCCAAATATTACGCGATCAAAAATTAACGCCGCTCGAAGTTGTACCCGCGGCGCAAAGTGATAAACAGGTTAAAG GCCAAAAAACGTCATTACTTGGCGGTTTGTTTAAACCTACTATATCAACCTCAGATTTGGCGCTTATAACTCGCCAGTTA GCAACACTCATTCAATCGGCTCTGCCAGTTGAGGGTGCGGTAATGGCTGTGGCTGAGCAATGTGAAAAACCACGTTTAAA ACGCATGCTGATGTCGGTTCGCTCAAAAGTAGTGGAAGGGTATACCCTTGCCGACGGTATGAGTGAGTTTCCGCATGTGT TTGACGATTTATACCGCGCTATGGTTGCCGCAGGCGAAAAGTCAGGGCATTTAGACCAAGTACTAAACCGGCTTGCCGAT TACACCGAGCAGCGCCAATATATGCGCAGTCAAATAACACAAGCTATGGTGTACCCCATTATTTTAGTGGTGTTTGCTAT TGCAATTGTGTCGGTTTTATTAGGTACTGTAGTACCTAAAATACTTAAAACGTTTGAAAAAACCAAGCAAGTACTCCCTT GGACCACTGAGTGGGTAATGGCGGGAAGTCATTTTGTACAAAATTATTGGTTTATTAGTTTAATTGTAATAACGGCCCTA GCGATAGGGATTAAGCATGCTTTAAAACAGCCTAAAATTCGTTTTTGGTGGGATGATAAAATATTGCATATGCCCGGTAT TGGTAAAGTAGCTAGAGGTATTAATACCGCTCGTTTTGCCCGAACTTTAAGTATTTTATCATCAAGCTCGGTACCGCTAC TTGAAGGTATGCGTATTGCGGGTGGAGTGCTGATCAACGAAAAAATTAAAAAAGCAGTTGCCGATGCAGCCGATAGAGTA AGCGAAGGGGCAAGTTTAAGAGCGGCATTACAGCAAACTAAATTGTTTCCGCCAATGATGCTACATATGATAGCCAGTGG TGAAAAATCTGGCGAGCTGGAGCAAATGTTAGAACGCGCTGCTAATAACCAGGACCGCGAATTTGAAAGTATGGTTAATG TATCGCTAAAACTATTAGAACCCGCAATGATCGCCTTAATGGCGGTTATTGTATTATTTATAGTAATGGCAATTTTACAG CCAATTATGGCAATGAATAAAGCTGTAGGGCTTTAA Protein sequence : MAAFEYRALDGRGKEKKGILEADTAKQIRQILRDQKLTPLEVVPAAQSDKQVKGQKTSLLGGLFKPTISTSDLALITRQL ATLIQSALPVEGAVMAVAEQCEKPRLKRMLMSVRSKVVEGYTLADGMSEFPHVFDDLYRAMVAAGEKSGHLDQVLNRLAD YTEQRQYMRSQITQAMVYPIILVVFAIAIVSVLLGTVVPKILKTFEKTKQVLPWTTEWVMAGSHFVQNYWFISLIVITAL AIGIKHALKQPKIRFWWDDKILHMPGIGKVARGINTARFARTLSILSSSSVPLLEGMRIAGGVLINEKIKKAVADAADRV SEGASLRAALQQTKLFPPMMLHMIASGEKSGELEQMLERAANNQDREFESMVNVSLKLLEPAMIALMAVIVLFIVMAILQ PIMAMNKAVGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 3e-86 | 50 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-85 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspF | YP_338780.1 | general secretion pathway protein F | VFG2049 | Protein | 5e-83 | 50 |
| gspF | YP_338780.1 | general secretion pathway protein F | VFG0181 | Protein | 1e-85 | 47 |
| gspF | YP_338780.1 | general secretion pathway protein F | VFG1870 | Protein | 1e-78 | 42 |
