Gene Information

Name : exeE (PSHAa0233)
Accession : YP_338779.1
Strain :
Genome accession: NC_007481
Putative virulence/resistance : Virulence
Product : general secretion pathway protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 247860 - 249425 bp
Length : 1566 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1640836; Product type t : transporter

DNA sequence :
ATGACTAAGGCGATTGCAGAGATAAACCAAGATGTGGTTCATCCTAATGCGCATCATCCGGACGAGCTATTAACCAGTGA
CGACTTAGTTGAGTTACCCGCTAAACGTTTGCCTTTTTCATACGCACGGCGAGCCGGTGTACTGCTGAGTAAAAATAAAG
AGCAGCGCATAGTGTATTACCGTGGCGAACTTGATATTGACGTACTGTTAGAAGTACGCCGTATTGCAGGGCATGGTTTT
ACGCTTGAGCAGCTTGCTGATGACAAGTTTGAGCTACTGCTAGAGGCTTCGTATCAGCGAGATAGTTCTGAAACGCAACA
AATGATGGAAGACATTGGCAACGAAGTTGACTTGTTTTCATTAGTAGACGAACTGCCACAAACCGAAGATTTACTGGCAG
GCGATGATGATGCGCCAATTATTAAGCTTATAAATGCGATGCTCAGTGAAGCAATTAAAGAGGGTGCGTCTGATATTCAT
ATTGAAACCTTTGAGCAAGAACTGGTTATTCGCTTTAGGGTTGATGGTGTATTAAAAGAGGTACTTAAACCTAATCGTAA
ATTAGCATCCTTGCTGGTATCGCGAATTAAGGTAATGGCTAAGCTCGATATTGCCGAAAAACGTATACCACAAGATGGCC
GTATTAGTTTGCGTATTGCAGGGCGTGCAGTTGATGTACGGGTATCAACCATGCCATCGAGTTTTGGTGAGCGTGTTGTG
CTGCGTTTACTGGATAAAAATAACGCGCACTTAAATCTTGAAGATTTAGGTATGACCGCACAAAACCGTGAATTGTTTGC
AAATTTAATTAGTAAACCTCATGGCATTATTTTAGTAACCGGGCCTACAGGCTCTGGTAAAAGTACCACCTTGTACGCAG
GTATGAGTCAAATAAACTCTCGCGATCGTAATATTTTAACGGTTGAAGATCCCATTGAATACGAAATACCGGGCATTGGC
CAAACGCAAGTAAATACTAAAGTAGGTATGACCTTTGCGCGTGGCTTACGGGCTATTTTACGTCAAGACCCCGATGTAGT
GATGGTAGGTGAAATACGTGACCTAGAAACCGCTCAAATTGGTGTGCAAGCATCATTAACCGGTCACTTGGTAATGTCTA
CGTTGCATACAAATACTGCTTCTGGCGCTATTACTCGTATGGAAGATATGGGAGTGGAGCCATTTTTACTTTCATCGTCG
TTACTCGGTGTGTTATCGCAGCGACTAGTACGTACACTGTGTAAAAATTGTAAAAAAGAACATGTAGCCGATGAGCGCGA
GTGCCAGTTATTAGGCGTACCGTTTGAAAGTAAACCAACTATACACCGTGCAGTAGGGTGTGAAGCATGTAACTTTAATG
GTTATAAAGGCCGTACTGGTATTCATGAGTTATTAGTGGTGGACGAAACCATTCGTGAAATGATCCACAATGGTAAGGGC
GAGCAAAGCGTTGAAAAATACATTCGCAAGCTCAGTCCAAGTATTCGTCAAGATGGCTGTAGCCGTGTACTTGCAGGTAA
AACAACACTTGAAGAAGTATTGCGTGTTACCCGTGAGGAAGGCTAA

Protein sequence :
MTKAIAEINQDVVHPNAHHPDELLTSDDLVELPAKRLPFSYARRAGVLLSKNKEQRIVYYRGELDIDVLLEVRRIAGHGF
TLEQLADDKFELLLEASYQRDSSETQQMMEDIGNEVDLFSLVDELPQTEDLLAGDDDAPIIKLINAMLSEAIKEGASDIH
IETFEQELVIRFRVDGVLKEVLKPNRKLASLLVSRIKVMAKLDIAEKRIPQDGRISLRIAGRAVDVRVSTMPSSFGERVV
LRLLDKNNAHLNLEDLGMTAQNRELFANLISKPHGIILVTGPTGSGKSTTLYAGMSQINSRDRNILTVEDPIEYEIPGIG
QTQVNTKVGMTFARGLRAILRQDPDVVMVGEIRDLETAQIGVQASLTGHLVMSTLHTNTASGAITRMEDMGVEPFLLSSS
LLGVLSQRLVRTLCKNCKKEHVADERECQLLGVPFESKPTIHRAVGCEACNFNGYKGRTGIHELLVVDETIREMIHNGKG
EQSVEKYIRKLSPSIRQDGCSRVLAGKTTLEEVLRVTREEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 4e-144 65
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-144 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
exeE YP_338779.1 general secretion pathway protein E VFG2048 Protein 1e-144 65
exeE YP_338779.1 general secretion pathway protein E VFG0182 Protein 4e-142 65
exeE YP_338779.1 general secretion pathway protein E VFG1876 Protein 8e-125 56
exeE YP_338779.1 general secretion pathway protein E VFG2426 Protein 9e-66 45
exeE YP_338779.1 general secretion pathway protein E VFG0112 Protein 2e-81 44