|
Name : BURPS1710b_A0572 (BURPS1710b_A0572) Accession : YP_335732.1 Strain : Genome accession: NC_007435 Putative virulence/resistance : Virulence Product : type III secretion low calcium response chaperone LcrH/SycD Function : - COG functional category : S : Function unknown COG ID : COG1729 EC number : - Position : 767162 - 767662 bp Length : 501 bp Strand : - Note : identified by match to protein family HMM PF07720; match to protein family HMM TIGR02552 DNA sequence : GTGAACATAGACGACATCGAGGCGCAGGAAATGGCGGCGGCGCTGCTGGACGCGGTCCAGAACGGCGCGACGCTGAAGGA CCTGCATCAGGTGCCGCAGGACCTGATGGACGGCATCTATGCGTTCGCGTACCGCTTCTACCAGCAGGGGCGGCTCGACG ACGCGGAGGTGTTCTTCCGCTTTCTGTGCATCTACGACTTCTACAACGCCGAATACGCGATGGGGCTCGCGGCGGTGTGC CAGTTGAAGAAGGAGTACGCGCGGGCGATCGATCTGTATGCACTCGCGTATTCGCTGTCGAAGGACGACCACCGGCCGAT GTTCCACACCGGCCAATGCCATCTGCTGATGGGCAAGGCGGCGCTCGCGCGGCGCTGCTTCGGCATCGTCGCCGAGCGCT CGCGCGACGAGCGCCTCGCGCAGAAGGCGCAGTCCTATCTCGACGGGCTCGACGAAGTGGGCGCCGATGCGGCGCCCGCA TCCGCCGGGAACGACCACTAG Protein sequence : MNIDDIEAQEMAAALLDAVQNGATLKDLHQVPQDLMDGIYAFAYRFYQQGRLDDAEVFFRFLCIYDFYNAEYAMGLAAVC QLKKEYARAIDLYALAYSLSKDDHRPMFHTGQCHLLMGKAALARRCFGIVAERSRDERLAQKAQSYLDGLDEVGADAAPA SAGNDH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sycB | AAS66850.1 | SycB | Not tested | SSR-1 | Protein | 3e-37 | 62 |
| sicA | YP_217805.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 2e-45 | 58 |
| spaT | NP_457280.1 | unknown function | Virulence | SPI-1 | Protein | 2e-45 | 58 |
| spaT | NP_806489.1 | hypothetical protein | Virulence | SPI-1 | Protein | 2e-45 | 58 |
| sicA | NP_461807.1 | secretion chaperone | Virulence | SPI-1 | Protein | 2e-45 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BURPS1710b_A0572 | YP_335732.1 | type III secretion low calcium response chaperone LcrH/SycD | VFG2451 | Protein | 2e-73 | 99 |
| BURPS1710b_A0572 | YP_335732.1 | type III secretion low calcium response chaperone LcrH/SycD | VFG0547 | Protein | 5e-46 | 58 |
| BURPS1710b_A0572 | YP_335732.1 | type III secretion low calcium response chaperone LcrH/SycD | VFG1769 | Protein | 4e-38 | 52 |
| BURPS1710b_A0572 | YP_335732.1 | type III secretion low calcium response chaperone LcrH/SycD | VFG0988 | Protein | 5e-44 | 51 |
