Gene Information

Name : tISRso14b (BURPS1710b_A1166)
Accession : YP_336323.1
Strain :
Genome accession: NC_007435
Putative virulence/resistance : Unknown
Product : IS407A, transposase OrfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1453415 - 1454248 bp
Length : 834 bp
Strand : -
Note : identified by match to protein family HMM PF00665

DNA sequence :
GTGTTGGCGATTCGGGAGAAGGTCAACATCTCCGAGCGCCGCGCCTGCCGGCTTGTCGGGCTTTCTCGCAGCGTGCTGCA
TTACGACGCGAAGCCGGACCACGAGAATGAGGTGCTCGCGGCGCGTCTGGTGAAGTTGGCGCACGAACGTCGTCGATTCG
GCTACCGCCGACTGCACGCCCTGGTGGAACGCGAAGGCACGCACGCCAATCACAAGCGCATCTATCGCCCGTACCGTGAG
GCAGGGCTGGCTGTGCGGCGGCGTCGCAAGCGCCACGGCGTCATGATTGAGCGCGAGCAACTGGCATTGCCGGGCGCACC
CAACGAGGTGTGGTCAATCGATTTCGTGATGGATGCGCTTTCCAACGGCCGGCGCGTGAAGTGCCTGACCGTCGTCGACG
ATTTCACGAAAGAGGCTGTCGACATCGTCGTCGACCATGGCATCTCAGGTTTGTATGTCGCTCGGGCATTGGACCGTGCA
GCTCGCTTCCGTGGCTATCGCAAGGCGGTGCGAACAGACCAGGGACCCGAATTTACGAGCCGCGCGCTTGACCAGTGGGC
GTATGCGAACGGCGTCACGCTGAAGTTGATTCAGGCGGGCAAGCCAACGCAGAATGCGTACATCGAATCGTTCAACGGCA
AGTTCCGCGACGAATGCCTTAACGAGCACTGGTTCACGACGCTCGCGCACGCTCGGGCAGTCATCGCGGCATGGCGTCAG
GACTACAACGAGCAAAGGCCGCACTGCGCACTGAACTACCTTGCGCCGTCAGAGTTTGCGGCGAAACATCGGGCAACCGC
GGACGCTCCTGCCGCTTTCCAGGAGTTGGTTTAA

Protein sequence :
MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAARLVKLAHERRRFGYRRLHALVEREGTHANHKRIYRPYRE
AGLAVRRRRKRHGVMIEREQLALPGAPNEVWSIDFVMDALSNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRA
ARFRGYRKAVRTDQGPEFTSRALDQWAYANGVTLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQ
DYNEQRPHCALNYLAPSEFAAKHRATADAPAAFQELV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 2e-71 74
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 5e-92 70
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 8e-52 64
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 6e-43 44
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 4e-44 43