Gene Information

Name : tISRso16a (BURPS1710b_A1114)
Accession : YP_336272.1
Strain :
Genome accession: NC_007435
Putative virulence/resistance : Unknown
Product : ISRSO16-transposase OrfA protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1393780 - 1394091 bp
Length : 312 bp
Strand : -
Note : identified by match to protein family HMM PF01527; match to protein family HMM TIGR01199

DNA sequence :
GTGTGCGAGCGGGCACGACGGCCCTGCCATGAAGGCGAGCAGTTTACGGAGGCGCAGATCGTATACGCGTTGAAGCAGGC
CGAACCGGGTACGACGGTCGCGAAGGTATGCCGCAAGCTGAGAATCAGCGACGCGACGTTTTACAGCCGGCGAACGAAAT
ACGGCGGGCTGTCGCCCTCGGAGTTGCATTGGGTAAAGCCGCTTGAAGACGAGAACGCGAAGCTCGAGCGGCTCGTGGCC
GACCTCTCGCTGGACAAGGCGATGCTGCGGAACGTGCCGTCAAAGAGCTCTGAAACCTTCTCGGCGCCGTGA

Protein sequence :
MCERARRPCHEGEQFTEAQIVYALKQAEPGTTVAKVCRKLRISDATFYSRRTKYGGLSPSELHWVKPLEDENAKLERLVA
DLSLDKAMLRNVPSKSSETFSAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 5e-20 64
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 3e-20 64
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 2e-13 46
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 2e-12 44
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 2e-12 44
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 5e-12 43
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 3e-12 43