Gene Information

Name : BURPS1710b_0335 (BURPS1710b_0335)
Accession : YP_331751.1
Strain :
Genome accession: NC_007434
Putative virulence/resistance : Unknown
Product : Phage portal protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG5518
EC number : -
Position : 348361 - 349452 bp
Length : 1092 bp
Strand : +
Note : identified by match to protein family HMM PF04860; match to protein family HMM TIGR01540

DNA sequence :
TTGTCGTCGTGGCGCCGCCGCGCGTCGACGACGGCGTCTTCCGCGTGCTCGAACGTCACCAGTTCCGCGGCAACGACTTT
GAGGAACAGGCCGCGCCAAATCCGAGCGCCGGCGCGCGCCGAGGTCTTCACGTTCGACGATCCGACGCCCGTCATGAACC
GGGCCGAGATTCTCGATTACGTCGAGTGCTGGTCGAACGGCGAATGGTTCGAGCCGCCGGTCAGCTTCGCCGGCTTGGCG
AAATCGTTTCGCGCGAGCACGCACCATAGCTCGGCGCTGTTCTTCAAGGCGAACGTGCTGGCGTCGACGTTTCGCCCGCA
CCGCTGGCTGTCGCGGCACGCGTTCGAGCGGTGGGCGCTCGATTTCCTGACGTTCGGCAACGGCTATCTGGAACGCCGCC
GCAACATGGTCGGCGGCACGCTGCGGCTCGAGCCCGCGCTCGCGAAGTACGTACGGCGCAAGGCCGATTTCAGCGGCTTC
GTGTACGTGAACGGCTGGCAGGAGCGGCACGAGTTCGCGCCCGACAGCGTGTTCCAGCTCGTGCGGCCGGACATCAATCA
GGAGGTCTATGGCCTGCCCGAGTATCTGAGCTCGCTGCACTCGGCGTGGCTGAACGAATCGTCGACGCTGTTCCGGCGCA
AGTATTACGAGAACGGCAGCCACGCCGGCTTCATCCTGTACATGACCGACGCCGCGCAGAAGCAGGACGACGTGGACAAC
ATGCGCGACGCGCTGAAGAACGCGAAGGGGCCGGGCAACTTCCGCAACGTGTTCATGTACGCGCCGGGCGGGAAGAAGGA
CGGCATCCAGCTCATTCCCGTGTCCGAGGTCGCCGCGAAGGACGAGTTCTTCAACATCAAGAACGTGACGCGCGATGACC
TGCTCGCCGCACACCGCGTGCCGCCGCAGTTGCTTGGCATCGTGCCGAGCAATTCGGGCGGGTTCGGCACGCCGGACACC
GCCGCGCGCGTGTTCGGGCGCAACGAAATCAGGCCGCTACAGGCGCGCTTCGCCGAGCTGAACGACTGGCTCGGCGACGA
GGTCGTGAGGTTCGACGATTACGAGATTCCGCCGGCGCCGGTCGCGGCGTAG

Protein sequence :
MSSWRRRASTTASSACSNVTSSAATTLRNRPRQIRAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLA
KSFRASTHHSSALFFKANVLASTFRPHRWLSRHAFERWALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKADFSGF
VYVNGWQERHEFAPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDN
MRDALKNAKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDT
AARVFGRNEIRPLQARFAELNDWLGDEVVRFDDYEIPPAPVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 2e-103 62
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 2e-103 62
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 4e-91 60