Gene Information

Name : rdgB (BURPS1710b_3052)
Accession : YP_334427.1
Strain :
Genome accession: NC_007434
Putative virulence/resistance : Unknown
Product : deoxyribonucleotide triphosphate pyrophosphatase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0127
EC number : -
Position : 3364000 - 3364632 bp
Length : 633 bp
Strand : +
Note : HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine

DNA sequence :
ATGACGATGTCGCACGCATCGCCCGACGCCGCGCGCTCGCGCATCGTCCTCGCCTCGAACAATCCCGGCAAGCTGCGCGA
GTTCGCCGCGCTCTTCTCGACGGCGGGCATCGACATCGTGCCGCAAGGCGAGCTCGGCGTATCGGAAGCCGACGAACCGC
ACGCGACCTTCGTCGAGAACGCGCTCGCGAAGGCACGCCATGCGTCGCGCGCGACGGGCCTGCCCGCCGTCGCCGACGAT
TCCGGCCTGTGCGTGCCCGCGCTGCTCGGCGCGCCGGGCGTCTACTCGGCGCGCTACGCGCAGCGCGCCGGCCGCGAGAA
GAGCGATGCGGCGAACAACGCGTATCTCGTCGAGCAGTTGCGCGAGGTCGCGGATCGGCACGCGTATTACTACTGCGTGC
TCGCGCTCGTGCGGCACGCGGACGATCCGGAGCCGCTCATCGCCGAAGGGCGCTGGGCGGGCGAGATCGTCGACGCACCA
CGCGGCGCGCACGGCTTCGGCTACGATCCGCACTTCTTCGTGCCGGCGCTCGGCGCGACGGCGGCCGAGCTCGATCCGGC
CGCGAAGAACGCGGCGAGCCACCGCGCGCTCGCGCTGAAGGCGCTCGTCGCGCGGCTCGGAGAAATTCGATGA

Protein sequence :
MTMSHASPDAARSRIVLASNNPGKLREFAALFSTAGIDIVPQGELGVSEADEPHATFVENALAKARHASRATGLPAVADD
SGLCVPALLGAPGVYSARYAQRAGREKSDAANNAYLVEQLREVADRHAYYYCVLALVRHADDPEPLIAEGRWAGEIVDAP
RGAHGFGYDPHFFVPALGATAAELDPAAKNAASHRALALKALVARLGEIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 4e-18 42