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Name : fliP (BURPS1710b_0243) Accession : YP_331659.2 Strain : Genome accession: NC_007434 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 253679 - 254440 bp Length : 762 bp Strand : + Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGAAAACCGCTTGCCTGCGCGGCGCGGCGCGCTGGCTGCCCGCGATCCTGATCGGCCTCGCGCCCGCGCTCGCGTGCGC GCAGGCGGCCGGGCTGCCGGCGTTCAACTCGGCGCCGGGCTCGAACGGCGGCACGACCTATTCGTTGAGCGTGCAGACGA TGCTGCTGCTCACGATGCTGTCGTTCCTGCCGGCGATGCTGCTGATGATGACGAGCTTCACGCGGATCATCATCGTGCTG TCGCTGCTGCGGCAGGCGATCGGCACCGCGTCGACGCCGCCGAATCAGGTGCTCGTCGGGCTCGCCCTCTTCCTCACGCT GTTCGTGATGTCGCCCGTGCTCGACCGCGCGTACAACGACGCGTACAAGCCGTTTTCCGAGGGCACGCTGCAGATGGACC AGGCGGTGCAGCGCGGCACCGCGCCCTTCAAGGCGTTCATGCTAAAGCAGACGCGCGAGACCGATCTCGCGCTGTTCGCG AAGATCTCGAAGGCCGCGCCGATGCAGGGGCCGGAGGACGTGCCGCTGTCGCTGCTCGTGCCGGCGTTCGTCACAAGCGA GCTGAAGACGGGGTTCCAGATCGGCTTCACGATCTTCATCCCGTTTCTCATCATCGACATGGTTGTCGCGAGCGTGCTGA TGTCGATGGGGATGATGATGGTGTCGCCCGCGACGGTGTCGCTGCCGTTCAAGCTGATGCTGTTCGTGCTCGTCGACGGC TGGCAGTTGCTGATCGGCTCGCTCGCGCAGAGCTTCACCTAG Protein sequence : MKTACLRGAARWLPAILIGLAPALACAQAAGLPAFNSAPGSNGGTTYSLSVQTMLLLTMLSFLPAMLLMMTSFTRIIIVL SLLRQAIGTASTPPNQVLVGLALFLTLFVMSPVLDRAYNDAYKPFSEGTLQMDQAVQRGTAPFKAFMLKQTRETDLALFA KISKAAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDMVVASVLMSMGMMMVSPATVSLPFKLMLFVLVDG WQLLIGSLAQSFT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 1e-27 | 42 |
| hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 4e-28 | 42 |
| hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 4e-28 | 42 |
| hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 3e-28 | 42 |
| hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 8e-27 | 41 |
| hrcR | NP_791222.3 | type III secretion protein HrcR | Virulence | Hrp PAI | Protein | 1e-15 | 41 |
| hrpW | AAB05075.1 | HrpW | Virulence | Hrp PAI | Protein | 5e-14 | 41 |
| hrcR | AAG33884.1 | HrcR | Virulence | Hrp PAI | Protein | 4e-16 | 41 |
| hrcR | ABQ88359.1 | HrcR | Virulence | Hrp PAI | Protein | 5e-14 | 41 |
| XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 8e-29 | 41 |
| hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 8e-29 | 41 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 1e-24 | 41 |
| hrcR | AAB06005.2 | HrcR | Virulence | Hrp PAI | Protein | 7e-23 | 41 |
| hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 4e-15 | 41 |
| hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 4e-15 | 41 |
| hrcR | YP_198720.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 1e-27 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_331659.2 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 2e-92 | 99 |
| fliP | YP_331659.2 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 5e-65 | 69 |
| fliP | YP_331659.2 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 4e-56 | 62 |
| fliP | YP_331659.2 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 4e-52 | 56 |
| fliP | YP_331659.2 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 5e-25 | 41 |
| fliP | YP_331659.2 | flagellar biosynthesis protein FliP | VFG0188 | Protein | 1e-25 | 41 |
