Gene Information

Name : cadA (BURPS1710b_0150)
Accession : YP_331566.1
Strain :
Genome accession: NC_007434
Putative virulence/resistance : Resistance
Product : cadmium-translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : 3.6.3.-
Position : 156986 - 159127 bp
Length : 2142 bp
Strand : -
Note : identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525

DNA sequence :
GTGCGCTCGGCGTTCCGGATCATGCAGATGGACTGCCCGACCGAGGAGACACTGATCCGCAAGAAGCTGGGCGCGATGTC
CGAAGTCGCGGCGCTCGAATTCAACCTGATGCAGCGGATGCTCGCGGTCGAGCACGTGCCGGGCGCGGAAGCCGGCATCG
CCGCCGCGATCCGCTCGCTCGGCATGACGCCCGAACAGGCGGACGCCGGCGCGTCGGGCCGTGGCGCGTTGCCCGCGCCG
GCCGACGCGCCGCGCCCGTGGTGGCCGCTCGCGGTCGCGGGCGTCGCGGCGGCGGCGTCGGAAGCGGCCACGTGGCTGCA
ACTGCCGGTATGGCTCGCCGCCGCGCTCGCGCTCGCCGCGGTCGCGACCTGCGGCCTCGGCACGTATCGCAAGGGCTGGA
TCGCGCTCACGAACGGCAACCTGAACATCAACGCGCTGATGAGCATCGCGGTGACGGGCGCGATGGCGATTGGCCAGTGG
CCCGAGGCCGCGATGGTGATGGTGCTCTTCACCGTCGCCGAATTGATCGAGGCGCGCTCGCTCGACCGTGCGCGCAACGC
GATCCAGAGCCTGATGCGCCTCGCGCCCGACACCGTGACGCTCAGGCAGCCCGACGGCACGTGGCAGCCGGTCGACGCCG
CGCAGGTCGCGCTCGGTGCGATCGTGCGCGTGAAGCCCGGCGAGCGCATCGGCCTCGACGGCGAGATCGTTGCCGGCCGC
TCGACCGTCAACCAGGCGCCGATCACGGGCGAGAGCCTGCCCGTCGAGAAAACCGAGGGCGACGCGGTGTACGCGGGCAC
GATCAACGAAGCCGGCTCGTTCGAATATCGGGTGACGGCGGTCGCGAGCAACACGACGCTCGCGCGGATCATCCATGCGG
TCGAGGAGGCGCAGGGCACGAAGGCGCCGACGCAGCGCTTCGTCGACAGCTTCGCGCGCGTCTACACGCCGATCGTGTTC
GCGATCGCGCTCGTCGTCGCGATCGCGCCGCCGCTCGTGCTCGACGGCGCATGGCGCGACTGGATCTATCGCGCGCTCGT
GCTGCTCGTGATCGCGTGCCCATGCGCGCTCGTGATCTCGACGCCCGTGACGATCGTATCGGGGCTCGCGGCGGCCGCGC
GGCGCGGGATTCTCGTGAAGGGCGGCGTGTACCTCGAGCAGGGGCGCCGCCTCGCGTGGCTCGCGCTCGACAAGACGGGC
ACGATCACGCGCGGCAAGCCGGTGCAGACCGATTTCGAGATGCGCGCAGCCGACGTCGACGCCGCGCTCGTGCGGGGGCT
CGCCGCGCGCCTCGCCGCGCGCTCGGATCACCCGGTTTCGCAGGCGGTCGCGGCGGCGAGCGCGGCTCAAGCCGGCGCGG
GCGGCGCCCCGCGCGCGAAGCCCGCGTCGTTCGCCGACGTCGCCGATTTCGAGGCGATTCCCGGCCGCGGCGTGCGCGGC
AAGATCGACGGCGTGCCGTACTGGCTCGGCAATCATCGCCTCGTCGAGGAGCTCGACTGCTGCACGAGCGCGCTCGAAGC
GCGTCTCGACGAGCTCGAGCGGCAGGGCAAGACGGTCGTGATGCTGATCGACGGCGCGCGCGTGCTCGGCCTCTTCGCGG
TGGCCGACACGGTGAAGGACACGAGCCGCGCGGCGGTTGCCGAGCTGCACGCGCTCGGCATCAAGACCGCGATGCTGACG
GGCGACAACCCGCACACCGCGCAAGCGATCGCGCAGCAGGTCGGCATCGACGACGCGCGCGGCAACCAACTGCCGCAGGA
CAAGCTCGCCGCCGTCGAAGCGCTCGCGGCGGGCGGCCGCGCGGTCGGCATGGTCGGCGACGGGATCAACGACGCGCCGG
CGCTCGCGCGCGCCGACATCGGCTTCGCGATGGGCGCGATGGGCACCGATACCGCGATCGAGACGGCCGACGTCGCGCTG
ATGGACGACGACCTGCGCAAGATCCCGGCGTTCGTGCGGCTGTCGCGCGCGACGCATCGCGTGCTCGTGCAGAACATCGC
GTTCGCGCTCGCCGTGAAGGCGGTGTTCGTCGGTCTCACGGTCGCGGGGATGGGCACGATGTGGATGGCGGTGTTCGCCG
ACGCGGGCGCGAGCCTCATCGTCGTCGGCAACGGCTTGCGGCTGTTGCGCCGCGGCCAATGA

Protein sequence :
MRSAFRIMQMDCPTEETLIRKKLGAMSEVAALEFNLMQRMLAVEHVPGAEAGIAAAIRSLGMTPEQADAGASGRGALPAP
ADAPRPWWPLAVAGVAAAASEAATWLQLPVWLAAALALAAVATCGLGTYRKGWIALTNGNLNINALMSIAVTGAMAIGQW
PEAAMVMVLFTVAELIEARSLDRARNAIQSLMRLAPDTVTLRQPDGTWQPVDAAQVALGAIVRVKPGERIGLDGEIVAGR
STVNQAPITGESLPVEKTEGDAVYAGTINEAGSFEYRVTAVASNTTLARIIHAVEEAQGTKAPTQRFVDSFARVYTPIVF
AIALVVAIAPPLVLDGAWRDWIYRALVLLVIACPCALVISTPVTIVSGLAAAARRGILVKGGVYLEQGRRLAWLALDKTG
TITRGKPVQTDFEMRAADVDAALVRGLAARLAARSDHPVSQAVAAASAAQAGAGGAPRAKPASFADVADFEAIPGRGVRG
KIDGVPYWLGNHRLVEELDCCTSALEARLDELERQGKTVVMLIDGARVLGLFAVADTVKDTSRAAVAELHALGIKTAMLT
GDNPHTAQAIAQQVGIDDARGNQLPQDKLAAVEALAAGGRAVGMVGDGINDAPALARADIGFAMGAMGTDTAIETADVAL
MDDDLRKIPAFVRLSRATHRVLVQNIAFALAVKAVFVGLTVAGMGTMWMAVFADAGASLIVVGNGLRLLRRGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 3e-109 46
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 3e-109 46
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 5e-109 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadA YP_331566.1 cadmium-translocating P-type ATPase BAC0298 Protein 0.0 66