Gene Information

Name : kdpB (BURPS1710b_1394)
Accession : YP_332804.1
Strain :
Genome accession: NC_007434
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : 3.6.3.12
Position : 1464620 - 1466779 bp
Length : 2160 bp
Strand : +
Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions

DNA sequence :
TTGAGCGCGCATCACGACACGAGAGGACTCGCGCAACGCCGGCCGGCCGGCGTTGCGTATCTGAGGATTGCAATGACTCA
ACATTCCGCTACGCGATCGATGTTCGACCCGGCGCTCGTGCGCCCGGCGATCGTCGATTCGTTCAAGAAACTCACGCCGC
GCACGCAGTTGCGCAACCCGGTGATGTTCTGCGTGTACGTCGGCAGCATCCTGGCGACGATCCTTTGGATCGCCGCGCTG
ACGGGGCAGGCCGAGGCGCCCGCGGGCTTCATTCTCGCGGTCGCGCTGTGGCTGTGGTTCACGGTGCTGTTCGCGAACTT
CGCCGAGGCGATCGCCGAGGGGCGCTCGAAGGCGCAGGCCGCGTCGCTTCGCAGCGCGAAGAAGGACGTGATGGCCAAGA
AGCTCAACGAGCCGCATCCGAAGTCGCCCGTGCGCATCATGACGGCGTCCGATCTGCGCCGCGGCGACGTCGTGCTCGTC
GAGGCGGGCGATACGATTCCGGCCGACGGCGAGGTGATCGAGGGCGTCGCGTCGGTCGACGAATCGGCGATCACCGGCGA
ATCCGCGCCGGTGATCCGCGAATCGGGCGGCGATTTTTCGTCGGTGACGGGCGGCACGCGCGTGCTGTCGGACTGGATCG
TCGTCAAGGTGACGGCGAACCCCGGCGAGGCGTTCCTCGACCGGATGATCGCGATGGTCGAAGGCGCGAAGCGCAAGAAG
ACGCCCAACGAGATCGCGCTCACGATCCTGCTCGTCGCGCTGACGATCGTGATGCTGCTCGCCACCGCGACGCTGCTGCC
GTTCTCGATGTTCTCGGTCGACGCGATGCACTCGGGCCACGTCGTGACGATCACCGCGCTCGTCGCGCTGCTCGTGTGCC
TGATCCCGACGACGATCGGCGGCCTGCTGTCCGCGATCGGCGTGGCCGGCATGAGCCGGATGATGCAGGCGAACGTGATC
GCGACATCGGGCCGCGCGGTGGAGGCCGCGGGCGACGTCGACGTGCTGCTGCTCGACAAGACGGGCACGATCACGCTCGG
CAACCGGCAGGCGTCGGCGTTCCTGCCCGCGCCCGAGGTGACCGAGGCGACGCTCGCCGACGCCGCGCAACTGTCGTCGC
TCGCCGACGAAACGCCGGAGGGCCGCAGCATCGTCGTGCTCGCGAAGGAGCGCTTCAACATTCGCCAGCGCGACATGGGC
GCGCTGCACGCGGTGTTCCTGTCGTTCTCCGCGCACACGCGCATGAGCGGCGTCGACCTCTCGCCCGAGCGCGAGATCAG
AAAGGGCGCGGCCGACGCGGTGAAGAAGTACGTCGAGAGCCACGGCGGACGCTTTCCGGCCGAGGTGACGAACGCGGTGA
CGGACGTCGCGCGGCGCGGCAGCACGCCGCTCGTGGTCGCCGAGAAGCGGGGGGCGCTCGCGCGCGTGCTCGGCGTGATC
GAGCTGAAGGACATCGTGAAGGGCGGCATCAAGGAGCGTTTCGCGGAGCTGCGCAAGATGGGCATCAAGACCGTGATGGT
GACGGGCGACAACCGGCTCACGGCCGCGGCGATCGCGGCGGAAGCGGGCGTCGACGATTTCCTCGCGGAAGCGACGCCCG
AGACGAAGCTCTCGACGATTCGCGAGCACCAGGCGGCGGGCCGGCTCGTCGCGATGACGGGCGACGGCACCAACGACGCG
CCGGCGCTCGCGCAGGCGGATGTGGCCGTCGCGATGAACACCGGCACGCAGGCCGCGAAGGAGGCGGGCAACATGGTCGA
CCTCGATTCGAATCCGACCAAGCTGATCGAGATCGTCGAGATCGGCAAGCAGATGCTGATGACGCGCGGCTCGCTCACGA
CGTTCTCGATCGCGAACGACATCGCGAAGTACTTCGCGATCATTCCGGCCGCGTTCGCGACCACCTATCCGCAGCTGAAC
GCGCTGAACGTGATGCATCTGGCCACGCCCGCGTCCGCGATCATGTCGGCCGTGATCTTCAATGCGCTCATCATCGTGCT
GCTGATTCCGCTCGCGCTCAAGGGCGTGAAGTATCGTCCGCTCGGCGCCGCGACGCTGCTGCGCCGCAATCTGCTCGTCT
ACGGCCTGGGCGGCATTCTCGTGCCGTTCGTCGGCATCAAGCTGATCGACGTCGTGCTCGCCGCGCTCGGCTGGGTTTAA

Protein sequence :
MSAHHDTRGLAQRRPAGVAYLRIAMTQHSATRSMFDPALVRPAIVDSFKKLTPRTQLRNPVMFCVYVGSILATILWIAAL
TGQAEAPAGFILAVALWLWFTVLFANFAEAIAEGRSKAQAASLRSAKKDVMAKKLNEPHPKSPVRIMTASDLRRGDVVLV
EAGDTIPADGEVIEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVVKVTANPGEAFLDRMIAMVEGAKRKK
TPNEIALTILLVALTIVMLLATATLLPFSMFSVDAMHSGHVVTITALVALLVCLIPTTIGGLLSAIGVAGMSRMMQANVI
ATSGRAVEAAGDVDVLLLDKTGTITLGNRQASAFLPAPEVTEATLADAAQLSSLADETPEGRSIVVLAKERFNIRQRDMG
ALHAVFLSFSAHTRMSGVDLSPEREIRKGAADAVKKYVESHGGRFPAEVTNAVTDVARRGSTPLVVAEKRGALARVLGVI
ELKDIVKGGIKERFAELRKMGIKTVMVTGDNRLTAAAIAAEAGVDDFLAEATPETKLSTIREHQAAGRLVAMTGDGTNDA
PALAQADVAVAMNTGTQAAKEAGNMVDLDSNPTKLIEIVEIGKQMLMTRGSLTTFSIANDIAKYFAIIPAAFATTYPQLN
ALNVMHLATPASAIMSAVIFNALIIVLLIPLALKGVKYRPLGAATLLRRNLLVYGLGGILVPFVGIKLIDVVLAALGWV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 2e-165 64
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 2e-165 64
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-135 56
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-135 56
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-135 56
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-135 56
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 4e-136 56
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 2e-135 56