Name : xerD (BURPS1710b_1067) Accession : YP_332479.2 Strain : Genome accession: NC_007434 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1122015 - 1122932 bp Length : 918 bp Strand : + Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : GTGGACGCGCTTGCCGCGTCGCCGGCGTGGCTCGACAGCCGCGCGTCGATCGATCTGTTCTGCGACGCGATGTGGCTCGA GCACGGGCTGTCGCGCAACACGCTCGACGCGTACCGGCGTGATCTGCAACTGTTCGCGCAATGGCTCGCCGCGCGGCATG TGGCGAGCGTCGATCATGCGAGCGAGCCGACGCTGACCGAATACATCGCCGCGCGCAGCGACGGCAAGGCGACGTCGTCG AATCGCCGGCTATCGGTGTTTCGCCGCTACTACGGCTGGGCGGTGCGCGAGCACCGCGCGGCCGTCGATCCGACGCTCAG GATCGCGTCGGCGAAGCAGGCGCCGAGGTTTCCGTCGACGCTGTCCGAGGCGCAGGTCGAGGCGCTTCTCGCCGCGCCCG ACGTCGATACGCCGCTCGGCCTGCGCGACCGCACGATGCTCGAACTGATGTATGCGAGCGGGTTGCGCGTGAGCGAGCTC GTCACGCTGAAGACGGTCGAGGTCGGATTGAACGAAGGCGTGGTGCGCGTGACGGGCAAGGGTTCGAAAGAGCGGCTCGT GCCGTTCGGCGAAGTCGCGCACGGCTGGATCGAGCGCTATCTGCGCGATGCACGGCCCGCGCTACTCGGTGCGCGCGCGG CGGATGCGCTGTTCGTCACCGCACGCGGCGACGGCATGACGCGCCAGCAATTCTGGAACATCATCAAGCGCCATGCGCAG CAGGCGGATGTTCGCGTGCATCTGTCGCCGCATACGCTGCGGCACGCGTTCGCGACGCATCTGCTCAATCACGGCGCGGA CCTGCGGGTCGTGCAACTGCTGCTCGGCCATAGCGATATCTCGACGACGCAGATCTACACGCACGTCGCGCGCGAGCGGC TGAAGACGCTGCATGCGGCGCATCATCCGCGCGGATGA Protein sequence : MDALAASPAWLDSRASIDLFCDAMWLEHGLSRNTLDAYRRDLQLFAQWLAARHVASVDHASEPTLTEYIAARSDGKATSS NRRLSVFRRYYGWAVREHRAAVDPTLRIASAKQAPRFPSTLSEAQVEALLAAPDVDTPLGLRDRTMLELMYASGLRVSEL VTLKTVEVGLNEGVVRVTGKGSKERLVPFGEVAHGWIERYLRDARPALLGARAADALFVTARGDGMTRQQFWNIIKRHAQ QADVRVHLSPHTLRHAFATHLLNHGADLRVVQLLLGHSDISTTQIYTHVARERLKTLHAAHHPRG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 4e-59 | 55 |
BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 4e-59 | 55 |