Gene Information

Name : abc30a (NP0100A)
Accession : YP_325713.1
Strain : Natronomonas pharaonis DSM 2160
Genome accession: NC_007426
Putative virulence/resistance : Resistance
Product : macrolides/ lipoproteins ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 42888 - 43544 bp
Length : 657 bp
Strand : +
Note : -

DNA sequence :
GTGCCGGCGATTGAGCTGACTGGCGTTACGCGACGCTACGAGGGGGGCGGTGAAACGGTCGTGGCGCTCGATTCGGTGTC
GCTTTCGGTCGACCGCGGCGCGTTCGTCGCGATAATGGGGCCGAGCGGCAGCGGCAAATCCACGCTGCTGAACGTCATCG
GGTTGCTCGATGCACCGGACGCTGGCAGCGTCGTCGTTGACGCTGTCGACGTAACTGACCTCGACACCGCCGAGCGGACA
CAGATGCGCAAGGAAACTGTCGGATTCGTCTTTCAGGACTTCCATCTCATCCCGACGCTGTCGGCCCAAGAGAACGTGGT
ATTGCCGACGATATACGACCGGGAGCCGCGGCAAGAGCGGGCGCGGGCGTTGCTGGAACGGGTCGGGCTTGGCGACCGGC
TCGACCACGCGCCGGACGAACTCAGCGGCGGCCAGAAACAGCGCGTCGCCATCGCGCGGTCGCTCATCAACGAACCGGGC
ATTATCCTCGCCGACGAACCGACCGGAAACCTCGACCGCGAGACGGGCACCCGGATACTGGAGACGCTAACCGACGTGAC
CGACCGCGGCGTTAGTGTCGTCGCGGTGACCCACGACCCGGCGGTCGCCGACCACGCCGACCGGACTATCGAACTCCGCG
ATGGGGTGATACAGTGA

Protein sequence :
MPAIELTGVTRRYEGGGETVVALDSVSLSVDRGAFVAIMGPSGSGKSTLLNVIGLLDAPDAGSVVVDAVDVTDLDTAERT
QMRKETVGFVFQDFHLIPTLSAQENVVLPTIYDREPRQERARALLERVGLGDRLDHAPDELSGGQKQRVAIARSLINEPG
IILADEPTGNLDRETGTRILETLTDVTDRGVSVVAVTHDPAVADHADRTIELRDGVIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-20 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-26 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
abc30a YP_325713.1 macrolides/ lipoproteins ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-32 50
abc30a YP_325713.1 macrolides/ lipoproteins ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 9e-40 48
abc30a YP_325713.1 macrolides/ lipoproteins ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 8e-33 43
abc30a YP_325713.1 macrolides/ lipoproteins ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 7e-31 41