Gene Information

Name : Ava_0910 (Ava_0910)
Accession : YP_321429.1
Strain : Anabaena variabilis ATCC 29413
Genome accession: NC_007413
Putative virulence/resistance : Virulence
Product : UvrB/UvrC protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1102384 - 1104855 bp
Length : 2472 bp
Strand : -
Note : -

DNA sequence :
ATGTTTGAACGCTTCACAGAAAAAGCCATTAAGGTAATCATGCTGGCCCAAGAAGAGGCCCGCCGTTTAGGTCACAACTT
CGTCGGAACCGAACAGATCCTCCTGGGTCTGATCGGGGAAGGTACGGGAGTTGCGGCCAAGGTGCTGAAATCGATGGGTG
TCAATCTCAAAGATGCCCGCATTGAGGTAGAAAAAATCATAGGCCGGGGTTCAGGCTTTGTGGCCGTGGAAATTCCGTTT
ACGCCACGGGCAAAGCGGGTTCTGGAACTATCCCTAGAAGAAGCGCGCCAATTAGGCCATAACTACATTGGCACCGAGCA
TCTGCTGTTGGGCCTGATCCGGGAAGGGGAAGGTGTGGCAGCCAGGGTGCTAGAAAACCTGGGAGTGGATCTATCTAAAG
TTAGAACCCAAGTCATCCGAATGCTGGGAGAAACAGCAGAGGTTTCGGCGACCGGGCAATCGGGACGCACCAAAACACCT
ACTTTGGATGAATTCGGATCGAACCTGACCCAAATGGCAACTGATAACAAGCTTGATCCTGTGGTGGGACGCGCCAAGGA
AATCGAGCGTGTGATTCAGATTTTGGGTCGCCGGACAAAAAATAACCCCGTATTGATTGGTGAACCTGGGGTTGGTAAAA
CCGCGATCGCCGAAGGTCTAGCATCACGCATCGCTAACAAAGATGTCCCCGACATCCTTGAAGATAAGCGTGTTGTGACA
CTGGATATCGGTTTACTCGTAGCGGGAACCAAGTACCGGGGTGAATTTGAAGAACGCTTGAAGAAAATCATGGATGAGAT
TCGTCAAGCGGGTAATGTAATACTTGTAATAGACGAAGTACACACCCTCATCGGTGCAGGTGCGGCCGAAGGCGCAATCG
ATGCGGCAAATATCCTCAAGCCAGCCTTGGCAAGAGGTGAATTGCAATGTATCGGTGCGACAACCTTAGATGAATACCGC
AAGCACATCGAACGGGACGCAGCGCTAGAACGCCGCTTCCAGCCAGTGATGGTCGGTGAACCCTCCGTCGATGAAACAAT
AGAAATTTTATATGGTTTGCGCGATCGCTACGAGCAACACCACAAGCTGAAAATCTCCGATGAAGCCTTAGTTGCGGCAG
CAAAATTATCTGATCGTTATATTAGCGATCGCTATCTGCCAGACAAAGCCATCGACTTGGTTGACGAAGCTGGTTCGCGC
GTGCGGTTGATGAACTCTCAGTTGCCCCCCGCAGCTAAAGAGTTAGATAAAGAACTGCGCCAAATCTTAAAAGAAAAAGA
TGATGCAGTCCGTTCCCAAGACTTTGATAGAGCTGGGGAACTGCGCGATCGGGAAATGGAAATCAAAGCCGAAATCCGCG
CGATCGCCCAAAGCAAAACCAATGCTTCTGGTACTGAAGGTCAAGAACCCGTCGTTACAGAAGAAGACATTGCTCACATC
GTGGCTTCGTGGACAGGCGTTCCCGTCAACAAGCTCACCGAATCCGAATCCGAAAAACTGCTGCACATGGAAGACACCTT
GCACCAGCGCTTAATCGGACAAGAAGATGCGGTGAAAGCAGTGTCACGGGCTATCCGTCGCGCTCGTGTCGGTTTGAAAA
ATCCCAACCGACCCATTGCTAGCTTTGTCTTCTCCGGGCCGACTGGTGTAGGTAAAACTGAGTTGGCGAAATCCTTGGCT
TCCTACTTCTTCGGTTCCGAAGAAGCAATGATCCGCTTGGATATGTCCGAGTACATGGAACGCCACACCGTCAGCAAGTT
GATTGGTTCACCTCCAGGTTACGTTGGTTATAACGAAGGTGGTCAATTAACCGAAGCTGTGCGCCGTCGTCCTTATACTG
TGGTGCTATTTGATGAAATCGAAAAAGCCCACCCCGATGTCTTCAATATGCTGCTGCAAATTTTAGAAGATGGTCGGTTA
ACAGATGCCAAAGGACGCACCGTGGACTTCAAAAACACCTTGCTGATTTTGACATCCAACATCGGTTCCAAGGTAATCGA
AAAAGGTGGTGGCGGTATCGGCTTCGAGTTCTCCGAAGACCAAACCGAAACACAATACAACCGCATTCGCTCCTTGGTGA
ACGAAGAACTGAAGCAATACTTCCGTCCTGAATTCCTCAACCGTCTAGATGAGATTATCGTCTTCCGTCAGTTGAGCAAA
GCCGAAGTTACGGAAATTGCGGACATTATGCTGAAAGAAGTGTTTGGTCGCCTCACAGAAAAAGGTATAACTTTAGAAGT
AAGCGATCGCTTCAAAGGCAGACTCATCGAAGAAGGTTACAGTCCGAGCTACGGTGCAAGACCATTACGCCGGGCAATTA
TGCGCTTGTTGGAAGATAGCCTAGCAGAAGAAATTCTGTCAGGCCGCATCAAAGATGGCGATGTCGCCCTCATTGATATT
GACGACAACGGCAATGTACAAGTTACCTCTCAACAGCGCCGGGAATTATTACCCCAAGGTGTTGAGTCATAG

Protein sequence :
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVSATGQSGRTKTP
TLDEFGSNLTQMATDNKLDPVVGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVT
LDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYR
KHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEQHHKLKISDEALVAAAKLSDRYISDRYLPDKAIDLVDEAGSR
VRLMNSQLPPAAKELDKELRQILKEKDDAVRSQDFDRAGELRDREMEIKAEIRAIAQSKTNASGTEGQEPVVTEEDIAHI
VASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKTELAKSLA
SYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRL
TDAKGRTVDFKNTLLILTSNIGSKVIEKGGGGIGFEFSEDQTETQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLSK
AEVTEIADIMLKEVFGRLTEKGITLEVSDRFKGRLIEEGYSPSYGARPLRRAIMRLLEDSLAEEILSGRIKDGDVALIDI
DDNGNVQVTSQQRRELLPQGVES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ava_0910 YP_321429.1 UvrB/UvrC protein VFG0079 Protein 0.0 60
Ava_0910 YP_321429.1 UvrB/UvrC protein VFG0080 Protein 6e-155 52