Gene Information

Name : Ava_4155 (Ava_4155)
Accession : YP_324649.1
Strain : Anabaena variabilis ATCC 29413
Genome accession: NC_007413
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.1
Position : 5182208 - 5183344 bp
Length : 1137 bp
Strand : -
Note : -

DNA sequence :
ATGGAATTTGAAACTAAAGCAATTCATGAAGGTCAACAATCAGATCCACAAACTGGTGCGGTGATTGTGCCAATTTATTT
AACTTCTACATATCAACAAGAAGCCATAGGTCAGCACAAAGGGTATGAATATTCTCGCACTGGAAACCCCACGCGTAATG
CTTTAGAAGAGGCTTTAGCAGCGATTGAAAATGGTGAATATGGTTTAGCATTTGCTTCTGGTTTAGCGGCTACTACCACT
GTCCTAAGTCTACTTAAAAGCTGCGATCATATTGTGGCTGGCGATGATTTGTATGGTGGTACTTATCGTTTATTAGAAAG
GGTGGTAAAAAATTGGGGTGTAACCACCACCTATGTAGATATTGATGATATTTCTAATTTTGCTAAAGCTATTCAACCCA
ACACTAAACTGATTTGGGTAGAAACTCCTACTAATCCCTTATTAAAAATCATTGATATTGCCGCACTAGCAAATATTGCT
GAGCAAAATAATCTTATTCTAGTAGTTGATAACACATTTGCTAGTCCTTACTTTCAAAGACCGTTAGATAATGGTGCTGA
TATTGTAGTTCACAGTACCACCAAATATTTAGGAGGACACAGCGATATTATTGGCGGCGCAGTGGTGACATCCAATGAGC
AACTATATACTGAATTGAAATTTTATCAAAACGCAATTGGGGCTGTTCCCAGTCCCTTTGATAGTTGGTTAGTGCTACGA
GGAATTAAAACATTAGCTGTCAGAATGCGAGAACATGAAAAAAATGCTTTGTTATTGGCTCAATTTTTAGAACAGCATCC
CAAAGTCGAACGCGTTTATTACCCAGGTTTACCTAGCCATGAACAACATCAATTGGCTAAATCACAAATGTCTGGTTTTG
GCGGGATGATTAGCTTGGAATTAAAAGGCGATTTTGCTGATGTAGAAAAATTTGCTTCTCGTCTCCAGTTATTTTTGTTA
GCAGAAAGCTTAGGCGGTGTAGAATCATTGCTTTGCTACCCTGCAAAAATGACTCATGGTTCTCTACCACAAGAAGAAAG
ATATAAACGGGGAATTAATGATAATTTAGTCCGTCTTTCTGTAGGAATTGAGAATGTATTAGACTTGCAAGCTGATTTGG
AGAATGCTTTAAGTTGA

Protein sequence :
MEFETKAIHEGQQSDPQTGAVIVPIYLTSTYQQEAIGQHKGYEYSRTGNPTRNALEEALAAIENGEYGLAFASGLAATTT
VLSLLKSCDHIVAGDDLYGGTYRLLERVVKNWGVTTTYVDIDDISNFAKAIQPNTKLIWVETPTNPLLKIIDIAALANIA
EQNNLILVVDNTFASPYFQRPLDNGADIVVHSTTKYLGGHSDIIGGAVVTSNEQLYTELKFYQNAIGAVPSPFDSWLVLR
GIKTLAVRMREHEKNALLLAQFLEQHPKVERVYYPGLPSHEQHQLAKSQMSGFGGMISLELKGDFADVEKFASRLQLFLL
AESLGGVESLLCYPAKMTHGSLPQEERYKRGINDNLVRLSVGIENVLDLQADLENALS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-80 48
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-81 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 7e-71 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ava_4155 YP_324649.1 cystathionine gamma-lyase BAC0207 Protein 7e-68 45