Gene Information

Name : Ava_0357 (Ava_0357)
Accession : YP_320878.1
Strain : Anabaena variabilis ATCC 29413
Genome accession: NC_007413
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 459886 - 461259 bp
Length : 1374 bp
Strand : +
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGCGGACAGAATGGGTTGCTAAACGACGTGGGCAAGGTAATGTAACTCAAATGCACTATGCACGTCAGGGTGTCATTAC
CGAAGAAATGCAGTATGTCGCCCAACGGGAAAATCTGCCGGCTGACCTCATTCGTGAGGAAGTAGCGCGGGGAAGAATGA
TTATCCCAGCTAATATTAATCACACTAATTTAGAGCCAATGGCAATTGGCATCGCCTCTAAATGTAAAGTAAATGCTAAT
ATCGGTGCCTCCCCCAACTCTTCCAATCTGCAAGAAGAAGTTGATAAGCTGAACTTGGCGGTGAAATATGGCGCTGATAC
CGTCATGGACTTGTCCACAGGCGGCGGGAACTTAGATGAAATTCGTACTGCCATCATTAACGCCTCCCCCGTACCCATTG
GTACAGTACCAGTCTATCAAGCCTTGGAAAGCGTCCACGGCACAATTGAAAATCTGACCCCAGAAGATTTTCTGCACATC
ATCGAAAAACACGCCCAGCAAGGGGTGGACTATCAAACCATCCATGCCGGAATTTTGATAGAACATTTACCCCTAGTCAG
AAGCCGCATCACCGGTATTGTTTCCCGTGGTGGTGGTATTTTGGCGCGGTGGATGCTACATCACCACAAACAAAACCCAC
TTTACACCCACTTCCGCGACATCATTGAAATTTTCAAGAGATATGATGTTTCCTTCAGTTTAGGCGATTCCCTCCGCCCT
GGCTGTACTCACGATGCGTCTGATGATGCCCAACTAGCGGAACTCAAAACCCTGGGACAACTCACCCGCAAAGCTTGGGA
ACACGATGTACAGGTGATGGTAGAAGGCCCTGGACACGTCCCAATGGATCAAATTGAGTTCAACGTCAAAAAGCAGATGG
AAGAGTGTTCTGAAGCACCATTCTATGTGTTAGGGCCATTGGTAACAGACATCGCCCCTGGTTATGATCACATCACTTCC
GCCATTGGCGCGGCGATGGCTGGTTGGTATGGTACAGCTATGCTGTGCTACGTTACACCAAAAGAACACTTGGGGTTACC
CAACGCTGAAGATGTCCGCAATGGCTTGATTGCTTATAAGATAGCCGCCCATGCAGCCGACATTGCTAGACATCGCCCAG
GTGCAAGAGACAGAGACGATGAACTCTCCAAAGCCCGTTATAACTTTGACTGGAACCGTCAGTTTGAATTATCACTAGAC
CCAGAAAGAGCGAAGGAATACCACGATGAAACCTTACCAGCAGATATTTACAAAACTGCCGAGTTCTGTTCGATGTGTGG
GCCTAAGTTCTGTCCTATGCAAACTAAGGTTGATGCTGATGCGCTGACAGAACTTGAGAAGTTCTTGGCGAAGGAAAAAG
AAGTCATGATTTAG

Protein sequence :
MRTEWVAKRRGQGNVTQMHYARQGVITEEMQYVAQRENLPADLIREEVARGRMIIPANINHTNLEPMAIGIASKCKVNAN
IGASPNSSNLQEEVDKLNLAVKYGADTVMDLSTGGGNLDEIRTAIINASPVPIGTVPVYQALESVHGTIENLTPEDFLHI
IEKHAQQGVDYQTIHAGILIEHLPLVRSRITGIVSRGGGILARWMLHHHKQNPLYTHFRDIIEIFKRYDVSFSLGDSLRP
GCTHDASDDAQLAELKTLGQLTRKAWEHDVQVMVEGPGHVPMDQIEFNVKKQMEECSEAPFYVLGPLVTDIAPGYDHITS
AIGAAMAGWYGTAMLCYVTPKEHLGLPNAEDVRNGLIAYKIAAHAADIARHRPGARDRDDELSKARYNFDWNRQFELSLD
PERAKEYHDETLPADIYKTAEFCSMCGPKFCPMQTKVDADALTELEKFLAKEKEVMI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 5e-126 62
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 5e-126 62
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 1e-122 57