Gene Information

Name : Ava_3369 (Ava_3369)
Accession : YP_323871.1
Strain : Anabaena variabilis ATCC 29413
Genome accession: NC_007413
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : 3.1.1.61
Position : 4192128 - 4192880 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence :
ATGTACACCAGTGAATCGATTAAGTATTCGGCTAGAACAGAGATTGGACAAACCAGTCGGATTCTGGTAGTGGAAGACGA
AGAACTCATCCAAGAAATGCTAGCAGTAGCACTGGAAGAGGAAGGTTATGGGGTAGTAACTGCTGCTGATGGTAGGTCAG
CTGTGGAGTATCTCAAAAGTTTTGAACCAAACGGAGGTGATTTTCCCTTTGATTTGGTGATTCTCGATTTGATGTTACCC
CAAATAAATGGCTTAGATATCTGCCGTTTGTTGCGTCATCAAGGCAACCCAGTACCAATTTTGATGCTCAGTGCCAAAGG
TAGTGAAACCGATCGCGTGTTAGGTTTAGAAGTAGGGGCAGATGACTATTTAACTAAGCCCTTTAGTATGCGGGAGTTGG
TGGCACGTTGTCGCGCTTTACTCCGTCGTCAGCGCCTCATCACTTTACCCCAACTACCTGTACTGAAATTTAAAGATGTG
ACTTTAAATCCTCAAGAGTGTCGCGTATTGGTACGAGGACAAGAAGTAAATCTTTCACCCAAAGAGTTCCGCTTGTTGGA
ACTGTTCATGAGTTACGCTCGTCGAGTATGGTCACGGGAACAATTGCTAGACCAGGTTTGGGGGCCGGATTTTGTCGGCG
ATAGCAAAACTGTAGATGTCCACATTCGTTGGTTGCGAGAAAAATTGGAACAAGACCCCAGTCACCCAGAATATATTGTG
ACTGTAAGAGGATTTGGATATCGATTCGGATAA

Protein sequence :
MYTSESIKYSARTEIGQTSRILVVEDEELIQEMLAVALEEEGYGVVTAADGRSAVEYLKSFEPNGGDFPFDLVILDLMLP
QINGLDICRLLRHQGNPVPILMLSAKGSETDRVLGLEVGADDYLTKPFSMRELVARCRALLRRQRLITLPQLPVLKFKDV
TLNPQECRVLVRGQEVNLSPKEFRLLELFMSYARRVWSREQLLDQVWGPDFVGDSKTVDVHIRWLREKLEQDPSHPEYIV
TVRGFGYRFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 6e-31 44
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 5e-31 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ava_3369 YP_323871.1 two component transcriptional regulator NC_012469.1.7685629. Protein 8e-37 47
Ava_3369 YP_323871.1 two component transcriptional regulator NC_002952.2859905.p0 Protein 2e-35 46
Ava_3369 YP_323871.1 two component transcriptional regulator NC_013450.8614421.p0 Protein 2e-35 46
Ava_3369 YP_323871.1 two component transcriptional regulator NC_007793.3914279.p0 Protein 2e-35 46
Ava_3369 YP_323871.1 two component transcriptional regulator NC_003923.1003749.p0 Protein 2e-35 46
Ava_3369 YP_323871.1 two component transcriptional regulator NC_002745.1124361.p0 Protein 2e-35 46
Ava_3369 YP_323871.1 two component transcriptional regulator NC_009782.5559369.p0 Protein 2e-35 46
Ava_3369 YP_323871.1 two component transcriptional regulator NC_002951.3237708.p0 Protein 2e-35 46
Ava_3369 YP_323871.1 two component transcriptional regulator NC_007622.3794472.p0 Protein 2e-35 46
Ava_3369 YP_323871.1 two component transcriptional regulator NC_002758.1121668.p0 Protein 2e-35 46
Ava_3369 YP_323871.1 two component transcriptional regulator NC_009641.5332272.p0 Protein 2e-35 46
Ava_3369 YP_323871.1 two component transcriptional regulator AE016830.1.gene1681. Protein 4e-43 44
Ava_3369 YP_323871.1 two component transcriptional regulator AE000516.2.gene3505. Protein 4e-37 44
Ava_3369 YP_323871.1 two component transcriptional regulator NC_007793.3914065.p0 Protein 1e-29 42
Ava_3369 YP_323871.1 two component transcriptional regulator NC_002758.1121390.p0 Protein 1e-29 42
Ava_3369 YP_323871.1 two component transcriptional regulator NC_010079.5776364.p0 Protein 1e-29 42
Ava_3369 YP_323871.1 two component transcriptional regulator NC_002952.2859858.p0 Protein 1e-29 42
Ava_3369 YP_323871.1 two component transcriptional regulator NC_007622.3794948.p0 Protein 1e-29 42
Ava_3369 YP_323871.1 two component transcriptional regulator NC_003923.1003417.p0 Protein 1e-29 42
Ava_3369 YP_323871.1 two component transcriptional regulator NC_013450.8614146.p0 Protein 1e-29 42
Ava_3369 YP_323871.1 two component transcriptional regulator NC_002951.3238224.p0 Protein 1e-29 42
Ava_3369 YP_323871.1 two component transcriptional regulator FJ349556.1.orf0.gene Protein 6e-34 42
Ava_3369 YP_323871.1 two component transcriptional regulator HE999704.1.gene2815. Protein 3e-39 42
Ava_3369 YP_323871.1 two component transcriptional regulator CP001918.1.gene5135. Protein 2e-14 42
Ava_3369 YP_323871.1 two component transcriptional regulator BAC0111 Protein 5e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ava_3369 YP_323871.1 two component transcriptional regulator VFG1563 Protein 3e-31 44
Ava_3369 YP_323871.1 two component transcriptional regulator VFG1702 Protein 2e-31 44
Ava_3369 YP_323871.1 two component transcriptional regulator VFG1390 Protein 2e-33 43